Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17j09
         (590 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021136-1|AAH21136.1|  250|Homo sapiens interferon, gamma-induc...    60   8e-09
AF097362-1|AAF04618.1|  261|Homo sapiens gamma-interferon induci...    60   8e-09
AB049659-1|BAC98466.1|  250|Homo sapiens legumaturain protein.         60   8e-09
BC031020-1|AAH31020.1|  250|Homo sapiens interferon, gamma-induc...    59   1e-08
J03909-1|AAA36105.1|  303|Homo sapiens gamma-interferon-inducibl...    53   9e-07
AK123477-1|BAC85622.1|  148|Homo sapiens protein ( Homo sapiens ...    41   0.004
AJ301506-1|CAC34211.1|  111|Homo sapiens T-cell receptor beta ch...    29   9.3  

>BC021136-1|AAH21136.1|  250|Homo sapiens interferon,
           gamma-inducible protein 30 protein.
          Length = 250

 Score = 59.7 bits (138), Expect = 8e-09
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +3

Query: 189 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 365
           V ++++YE+ C   + F++ +L PT   + + +++ L+P+G A   N +G   F+CQHG 
Sbjct: 62  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 366 PECFGNLIQDCTLNEM 413
            EC  N ++ C L+E+
Sbjct: 122 EECKFNKVEACVLDEL 137


>AF097362-1|AAF04618.1|  261|Homo sapiens gamma-interferon inducible
           lysosomal thiol reductase protein.
          Length = 261

 Score = 59.7 bits (138), Expect = 8e-09
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +3

Query: 189 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 365
           V ++++YE+ C   + F++ +L PT   + + +++ L+P+G A   N +G   F+CQHG 
Sbjct: 73  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 132

Query: 366 PECFGNLIQDCTLNEM 413
            EC  N ++ C L+E+
Sbjct: 133 EECKFNKVEACVLDEL 148


>AB049659-1|BAC98466.1|  250|Homo sapiens legumaturain protein.
          Length = 250

 Score = 59.7 bits (138), Expect = 8e-09
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +3

Query: 189 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 365
           V ++++YE+ C   + F++ +L PT   + + +++ L+P+G A   N +G   F+CQHG 
Sbjct: 62  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 366 PECFGNLIQDCTLNEM 413
            EC  N ++ C L+E+
Sbjct: 122 EECKFNKVEACVLDEL 137


>BC031020-1|AAH31020.1|  250|Homo sapiens interferon,
           gamma-inducible protein 30 protein.
          Length = 250

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +3

Query: 189 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 365
           V ++++YE+ C   + F++ +L PT   + + +++ L+P+G A   N +G   F+CQHG 
Sbjct: 62  VNVTLYYEALCGGCQAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 366 PECFGNLIQDCTLNEM 413
            EC  N ++ C L+E+
Sbjct: 122 EECKFNKVEACVLDEL 137


>J03909-1|AAA36105.1|  303|Homo sapiens gamma-interferon-inducible
           protein precursor protein.
          Length = 303

 Score = 52.8 bits (121), Expect = 9e-07
 Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
 Frame = +3

Query: 189 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 365
           V ++++YE+ C   + F++ +L PT   + + +++  +P+G A   N +G   F+CQ G 
Sbjct: 73  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTSVPYGNAQEQNVSGRWEFKCQLGE 132

Query: 366 PECFGNLIQDCTLNEM 413
            EC  N ++ C L+E+
Sbjct: 133 EECKFNKVEACVLDEL 148


>AK123477-1|BAC85622.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41483 fis, clone BRTHA2002808, highly  similar
           to GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR.
           ).
          Length = 148

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +3

Query: 279 DYIDLQLIPFGKASSINNGGDG-FECQHGPPECFGNLIQDCTLNEM 413
           + +++ L+P+G A   N  G   F+CQHG  EC  N ++ C L+E+
Sbjct: 2   EILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL 47


>AJ301506-1|CAC34211.1|  111|Homo sapiens T-cell receptor beta chain
           VJ region protein.
          Length = 111

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 480 RGDIQCIVKSNVPHDPVRECVYLGPGTLLQLDSER 584
           RGD      ++ P D V+E  Y GPGT L +  ER
Sbjct: 77  RGDSAAYFCASSPPDRVQETQYFGPGTRLLVLGER 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,268,667
Number of Sequences: 237096
Number of extensions: 1993473
Number of successful extensions: 4151
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4146
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)