Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17h03
(574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting... 293 3e-79
BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting... 235 8e-62
AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2 s... 235 8e-62
AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens ... 235 8e-62
X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase pr... 176 5e-44
BC020880-1|AAH20880.1| 293|Homo sapiens F-box protein 6 protein. 32 1.2
AL031731-6|CAI20214.1| 293|Homo sapiens F-box protein 6 protein. 32 1.2
AF233223-1|AAF67153.1| 293|Homo sapiens F-box protein FBG2 prot... 32 1.2
BC037291-1|AAH37291.1| 721|Homo sapiens GYLTL1B protein protein. 29 8.8
AK096021-1|BAC04675.1| 721|Homo sapiens protein ( Homo sapiens ... 29 8.8
>BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d1 protein.
Length = 351
Score = 293 bits (719), Expect = 3e-79
Identities = 130/164 (79%), Positives = 150/164 (91%)
Frame = +3
Query: 81 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 260
FN+D GYLEGL RG K G+L Q+DYLNLVQCETLEDLKLHLQ TDYG FLANE SPL+VS
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVS 68
Query: 261 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 440
IDD+L+EK+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PK
Sbjct: 69 VIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPK 128
Query: 441 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQD 572
CHPLGSFEQMEA+++A TPAELYNA+LVDTPLA FF DCISEQD
Sbjct: 129 CHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQD 172
>BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d2 protein.
Length = 350
Score = 235 bits (575), Expect = 8e-62
Identities = 101/162 (62%), Positives = 134/162 (82%)
Frame = +3
Query: 81 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 260
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 261 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 440
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 441 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISE 566
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSE 170
>AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2
subunit protein.
Length = 350
Score = 235 bits (575), Expect = 8e-62
Identities = 101/162 (62%), Positives = 134/162 (82%)
Frame = +3
Query: 81 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 260
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 261 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 440
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 441 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISE 566
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSE 170
>AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38708 fis, clone KIDNE2002872, moderately
similar to Mus musculus Ac39/physophilin mRNA. ).
Length = 350
Score = 235 bits (575), Expect = 8e-62
Identities = 101/162 (62%), Positives = 134/162 (82%)
Frame = +3
Query: 81 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 260
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 261 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 440
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 441 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISE 566
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSE 170
>X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase
protein.
Length = 274
Score = 176 bits (428), Expect = 5e-44
Identities = 76/95 (80%), Positives = 90/95 (94%)
Frame = +3
Query: 288 LVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQ 467
+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PKCHPLGSFEQ
Sbjct: 1 MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 60
Query: 468 MEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQD 572
MEA+++A TPAELYNA+LVDTPLA FF DCISEQD
Sbjct: 61 MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQD 95
>BC020880-1|AAH20880.1| 293|Homo sapiens F-box protein 6 protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 27 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 206
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 207 GTDYGTFLANEPSPLSV 257
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>AL031731-6|CAI20214.1| 293|Homo sapiens F-box protein 6 protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 27 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 206
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 207 GTDYGTFLANEPSPLSV 257
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>AF233223-1|AAF67153.1| 293|Homo sapiens F-box protein FBG2
protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 27 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 206
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 207 GTDYGTFLANEPSPLSV 257
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>BC037291-1|AAH37291.1| 721|Homo sapiens GYLTL1B protein protein.
Length = 721
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 345 LDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVAATPAELYNAVLV 524
L+ + +++M+ + + +P IP H G + M+ + +A PAEL +++
Sbjct: 141 LETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYGLMKLVLPSALPAELARVIVL 200
Query: 525 DTPLAPFFVDCISE 566
DT + F ISE
Sbjct: 201 DTDVT--FASDISE 212
>AK096021-1|BAC04675.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ38702 fis, clone KIDNE2002262, moderately
similar to Glycosyltransferase. ).
Length = 721
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 345 LDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVAATPAELYNAVLV 524
L+ + +++M+ + + +P IP H G + M+ + +A PAEL +++
Sbjct: 141 LETLFHTWMVPAVRVSFYHADQLKPRVSWIPNKHYSGLYGLMKLVLPSALPAELARVIVL 200
Query: 525 DTPLAPFFVDCISE 566
DT + F ISE
Sbjct: 201 DTDVT--FASDISE 212
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,819,922
Number of Sequences: 237096
Number of extensions: 1842623
Number of successful extensions: 3687
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3687
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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