BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17h01
(678 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358538-1|AAQ88902.1| 310|Homo sapiens RLGS1930 protein. 61 3e-09
AK074815-1|BAC11227.1| 975|Homo sapiens protein ( Homo sapiens ... 61 3e-09
AB162713-1|BAD89023.1| 983|Homo sapiens GPI7 protein. 61 3e-09
BC110878-1|AAI10879.1| 850|Homo sapiens PIGG protein protein. 53 8e-07
AK097244-1|BAC04984.1| 299|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AK074715-1|BAC11157.1| 894|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AC004472-3|AAC07985.1| 880|Homo sapiens P1.11659_3 protein. 39 0.019
BC065282-1|AAH65282.1| 672|Homo sapiens phosphatidylinositol gl... 30 6.6
BC036916-1|AAH36916.1| 672|Homo sapiens phosphatidylinositol gl... 30 6.6
AY358472-1|AAQ88836.1| 1089|Homo sapiens QKAS632 protein. 30 6.6
AL833956-1|CAD38806.1| 1026|Homo sapiens hypothetical protein pr... 30 6.6
AL353795-5|CAH70995.2| 672|Homo sapiens phosphatidylinositol gl... 30 6.6
AL353795-4|CAH70996.1| 1089|Homo sapiens phosphatidylinositol gl... 30 6.6
Z73417-1|CAI41970.1| 449|Homo sapiens XK, Kell blood group comp... 30 8.7
AY589511-1|AAT00456.1| 462|Homo sapiens membrane protein XPLAC ... 30 8.7
AY534239-1|AAT07088.1| 462|Homo sapiens XK-related protein 2 pr... 30 8.7
>AY358538-1|AAQ88902.1| 310|Homo sapiens RLGS1930 protein.
Length = 310
Score = 61.3 bits (142), Expect = 3e-09
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Frame = +1
Query: 220 ITALGALTLFLYGFFPLKYHSGKFA-HMSD--LPNFIDGVSIDGQQVYNSGENSVILMVI 390
I LG + +FL GFFP S A H ++ P G S + + + V++++I
Sbjct: 15 IEVLG-IAVFLRGFFPAPVRSSARAEHGAEPPAPEPSAGASSNWTTLPPPLFSKVVIVLI 73
Query: 391 DGLRYDFVTE----EYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQWRR 558
D LR DFV ++M YT L++ ++ +V A+PPTVTMPRIK
Sbjct: 74 DALRDDFVFGSKGVKFMPYTTYLVEKGASHSFVAEAKPPTVTMPRIK------------- 120
Query: 559 TINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLRVA 678
A+MTGS+ F DV N +PA+ DSV+R A
Sbjct: 121 ---------ALMTGSLPGFVDVIRNLNSPALLEDSVIRQA 151
>AK074815-1|BAC11227.1| 975|Homo sapiens protein ( Homo sapiens
cDNA FLJ90334 fis, clone NT2RP2002232. ).
Length = 975
Score = 61.3 bits (142), Expect = 3e-09
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Frame = +1
Query: 220 ITALGALTLFLYGFFPLKYHSGKFA-HMSD--LPNFIDGVSIDGQQVYNSGENSVILMVI 390
I LG + +FL GFFP S A H ++ P G S + + + V++++I
Sbjct: 15 IEVLG-IAVFLRGFFPAPVRSSARAEHGAEPPAPEPSAGASSNWTTLPPPLFSKVVIVLI 73
Query: 391 DGLRYDFVTE----EYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQWRR 558
D LR DFV ++M YT L++ ++ +V A+PPTVTMPRIK
Sbjct: 74 DALRDDFVFGSKGVKFMPYTTYLVEKGASHSFVAEAKPPTVTMPRIK------------- 120
Query: 559 TINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLRVA 678
A+MTGS+ F DV N +PA+ DSV+R A
Sbjct: 121 ---------ALMTGSLPGFVDVIRNLNSPALLEDSVIRQA 151
>AB162713-1|BAD89023.1| 983|Homo sapiens GPI7 protein.
Length = 983
Score = 61.3 bits (142), Expect = 3e-09
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Frame = +1
Query: 220 ITALGALTLFLYGFFPLKYHSGKFA-HMSD--LPNFIDGVSIDGQQVYNSGENSVILMVI 390
I LG + +FL GFFP S A H ++ P G S + + + V++++I
Sbjct: 15 IEVLG-IAVFLRGFFPAPVRSSARAEHGAEPPAPEPSAGASSNWTTLPPPLFSKVVIVLI 73
Query: 391 DGLRYDFVTE----EYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQWRR 558
D LR DFV ++M YT L++ ++ +V A+PPTVTMPRIK
Sbjct: 74 DALRDDFVFGSKGVKFMPYTTYLVEKGASHSFVAEAKPPTVTMPRIK------------- 120
Query: 559 TINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLRVA 678
A+MTGS+ F DV N +PA+ DSV+R A
Sbjct: 121 ---------ALMTGSLPGFVDVIRNLNSPALLEDSVIRQA 151
>BC110878-1|AAI10879.1| 850|Homo sapiens PIGG protein protein.
Length = 850
Score = 53.2 bits (122), Expect = 8e-07
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Frame = +1
Query: 220 ITALGALTLFLYGFFPLKYHSGKFA-HMSD--LPNFIDGVSIDGQQVYNSGENSVILMVI 390
I LG + +FL GFFP S A H ++ P G S + + + V++++I
Sbjct: 15 IEVLG-IAVFLRGFFPAPVRSSARAEHGAEPPAPEPSAGASSNWTTLPPPLFSKVVIVLI 73
Query: 391 DGLRYDFVTE----EYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPE 528
D LR DFV ++M YT L++ ++ +V A+PPTVTMPRIK E
Sbjct: 74 DALRDDFVFGSKGVKFMPYTTYLVEKGASHSFVAEAKPPTVTMPRIKERE 123
>AK097244-1|BAC04984.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ39925 fis, clone SPLEN2021122. ).
Length = 299
Score = 44.8 bits (101), Expect = 3e-04
Identities = 32/84 (38%), Positives = 43/84 (51%)
Frame = +1
Query: 427 MAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQWRRTINFWRDIFAMMTGSV 606
M YT L++ ++ +V A+PPTVTMPRIK A+MTGS+
Sbjct: 1 MPYTTYLVEKGASHSFVAEAKPPTVTMPRIK----------------------ALMTGSL 38
Query: 607 STFADVALNFGAPAVXGDSVLRVA 678
F DV N +PA+ DSV+R A
Sbjct: 39 PGFVDVIRNLNSPALLEDSVIRQA 62
>AK074715-1|BAC11157.1| 894|Homo sapiens protein ( Homo sapiens
cDNA FLJ90234 fis, clone NT2RM2000565. ).
Length = 894
Score = 44.8 bits (101), Expect = 3e-04
Identities = 32/84 (38%), Positives = 43/84 (51%)
Frame = +1
Query: 427 MAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQWRRTINFWRDIFAMMTGSV 606
M YT L++ ++ +V A+PPTVTMPRIK A+MTGS+
Sbjct: 1 MPYTTYLVEKGASHSFVAEAKPPTVTMPRIK----------------------ALMTGSL 38
Query: 607 STFADVALNFGAPAVXGDSVLRVA 678
F DV N +PA+ DSV+R A
Sbjct: 39 PGFVDVIRNLNSPALLEDSVIRQA 62
>AC004472-3|AAC07985.1| 880|Homo sapiens P1.11659_3 protein.
Length = 880
Score = 38.7 bits (86), Expect = 0.019
Identities = 28/100 (28%), Positives = 50/100 (50%)
Frame = +1
Query: 373 VILMVIDGLRYDFVTEEYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQW 552
V+L++ID LR+DF ++ ++ ++ A +Y + +PPT TM R+K
Sbjct: 70 VVLVLIDALRFDFAQPQH-SHRILEIQPHHARLYRSQVDPPTTTMQRLK----------- 117
Query: 553 RRTINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLR 672
A+ TGS+ TF D NF + A+ D++++
Sbjct: 118 -----------ALTTGSLPTFIDAGSNFASHAIVEDNLIK 146
>BC065282-1|AAH65282.1| 672|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class O protein.
Length = 672
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/100 (21%), Positives = 45/100 (45%)
Frame = +1
Query: 373 VILMVIDGLRYDFVTEEYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQW 552
V+L++ID LR+DF ++ + + + + I+ + ++Q
Sbjct: 70 VVLVLIDALRFDFAQPQH----SHVPREPPVSLPFLGKLSSLQRILEIQPHHARLYRSQV 125
Query: 553 RRTINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLR 672
+ + A+ TGS+ TF D NF + A+ D++++
Sbjct: 126 DPPTTTMQRLKALTTGSLPTFIDAGSNFASHAIVEDNLIK 165
>BC036916-1|AAH36916.1| 672|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class O protein.
Length = 672
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/100 (21%), Positives = 45/100 (45%)
Frame = +1
Query: 373 VILMVIDGLRYDFVTEEYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQW 552
V+L++ID LR+DF ++ + + + + I+ + ++Q
Sbjct: 70 VVLVLIDALRFDFAQPQH----SHVPREPPVSLPFLGKLSSLQRILEIQPHHARLYRSQV 125
Query: 553 RRTINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLR 672
+ + A+ TGS+ TF D NF + A+ D++++
Sbjct: 126 DPPTTTMQRLKALTTGSLPTFIDAGSNFASHAIVEDNLIK 165
>AY358472-1|AAQ88836.1| 1089|Homo sapiens QKAS632 protein.
Length = 1089
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/100 (21%), Positives = 45/100 (45%)
Frame = +1
Query: 373 VILMVIDGLRYDFVTEEYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQW 552
V+L++ID LR+DF ++ + + + + I+ + ++Q
Sbjct: 70 VVLVLIDALRFDFAQPQH----SHVPREPPVSLPFLGKLSSLQRILEIQPHHARLYRSQV 125
Query: 553 RRTINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLR 672
+ + A+ TGS+ TF D NF + A+ D++++
Sbjct: 126 DPPTTTMQRLKALTTGSLPTFIDAGSNFASHAIVEDNLIK 165
>AL833956-1|CAD38806.1| 1026|Homo sapiens hypothetical protein
protein.
Length = 1026
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/100 (21%), Positives = 45/100 (45%)
Frame = +1
Query: 373 VILMVIDGLRYDFVTEEYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQW 552
V+L++ID LR+DF ++ + + + + I+ + ++Q
Sbjct: 8 VVLVLIDALRFDFAQPQH----SHVPREPPVSLPFLGKLSSLQRILEIQPHHARLYRSQV 63
Query: 553 RRTINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLR 672
+ + A+ TGS+ TF D NF + A+ D++++
Sbjct: 64 DPPTTTMQRLKALTTGSLPTFIDAGSNFASHAIVEDNLIK 103
>AL353795-5|CAH70995.2| 672|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class O protein.
Length = 672
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/100 (21%), Positives = 45/100 (45%)
Frame = +1
Query: 373 VILMVIDGLRYDFVTEEYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQW 552
V+L++ID LR+DF ++ + + + + I+ + ++Q
Sbjct: 70 VVLVLIDALRFDFAQPQH----SHVPREPPVSLPFLGKLSSLQRILEIQPHHARLYRSQV 125
Query: 553 RRTINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLR 672
+ + A+ TGS+ TF D NF + A+ D++++
Sbjct: 126 DPPTTTMQRLKALTTGSLPTFIDAGSNFASHAIVEDNLIK 165
>AL353795-4|CAH70996.1| 1089|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class O protein.
Length = 1089
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/100 (21%), Positives = 45/100 (45%)
Frame = +1
Query: 373 VILMVIDGLRYDFVTEEYMAYTGQLLKNKSACIYVTVAEPPTVTMPRIKSPERKKEKAQW 552
V+L++ID LR+DF ++ + + + + I+ + ++Q
Sbjct: 70 VVLVLIDALRFDFAQPQH----SHVPREPPVSLPFLGKLSSLQRILEIQPHHARLYRSQV 125
Query: 553 RRTINFWRDIFAMMTGSVSTFADVALNFGAPAVXGDSVLR 672
+ + A+ TGS+ TF D NF + A+ D++++
Sbjct: 126 DPPTTTMQRLKALTTGSLPTFIDAGSNFASHAIVEDNLIK 165
>Z73417-1|CAI41970.1| 449|Homo sapiens XK, Kell blood group complex
subunit-related, X-linked protein.
Length = 449
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 118 FLYCNFAHHACFLVRLFTLCNIFKWFA*LHSFFNFTS 8
FLYC A A ++VR++ + W SFF F+S
Sbjct: 42 FLYCGEAASALYMVRIYRKNSETYWMTYTFSFFMFSS 78
>AY589511-1|AAT00456.1| 462|Homo sapiens membrane protein XPLAC
protein.
Length = 462
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 118 FLYCNFAHHACFLVRLFTLCNIFKWFA*LHSFFNFTS 8
FLYC A A ++VR++ + W SFF F+S
Sbjct: 55 FLYCGEAASALYMVRIYRKNSETYWMTYTFSFFMFSS 91
>AY534239-1|AAT07088.1| 462|Homo sapiens XK-related protein 2
protein.
Length = 462
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 118 FLYCNFAHHACFLVRLFTLCNIFKWFA*LHSFFNFTS 8
FLYC A A ++VR++ + W SFF F+S
Sbjct: 55 FLYCGEAASALYMVRIYRKNSETYWMTYTFSFFMFSS 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,166,166
Number of Sequences: 237096
Number of extensions: 1934282
Number of successful extensions: 7551
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7550
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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