Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17f22
(422 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 212 5e-55
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 212 5e-55
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 212 5e-55
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 212 5e-55
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 212 5e-55
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 212 5e-55
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 212 5e-55
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 210 2e-54
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 202 4e-52
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 1e-13
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 32 0.69
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 32 0.69
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 0.69
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 0.69
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 29 6.5
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 29 6.5
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 29 6.5
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 29 6.5
M26061-1|AAB69155.1| 860|Homo sapiens PDEA protein. 29 8.5
BC035909-1|AAH35909.1| 860|Homo sapiens phosphodiesterase 6A, c... 29 8.5
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 212 bits (517), Expect = 5e-55
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 118
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 212 bits (517), Expect = 5e-55
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 212 bits (517), Expect = 5e-55
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 212 bits (517), Expect = 5e-55
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 212 bits (517), Expect = 5e-55
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 118
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 212 bits (517), Expect = 5e-55
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 212 bits (517), Expect = 5e-55
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 210 bits (512), Expect = 2e-54
Identities = 100/110 (90%), Positives = 104/110 (94%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 202 bits (493), Expect = 4e-52
Identities = 97/110 (88%), Positives = 102/110 (92%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 271
+N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 421
AVHC VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+
Sbjct: 69 AVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIE 118
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 1e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2
Query: 116 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 223
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.69
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 86 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 247
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.69
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 86 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 247
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.69
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 86 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 247
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.69
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 86 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 247
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 414 PKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 280
P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1742 PTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1786
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 414 PKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 280
P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 391 PTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 435
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 414 PKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 280
P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1483 PTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1527
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 414 PKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 280
P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1565 PTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1609
>M26061-1|AAB69155.1| 860|Homo sapiens PDEA protein.
Length = 860
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 164 LTRAAKVLEQLTGQQPVFSKARYTVRSF 247
L +KV E+LT + F KA YTVR+F
Sbjct: 242 LWSGSKVFEELTDIERQFHKALYTVRAF 269
>BC035909-1|AAH35909.1| 860|Homo sapiens phosphodiesterase 6A,
cGMP-specific, rod, alpha protein.
Length = 860
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 164 LTRAAKVLEQLTGQQPVFSKARYTVRSF 247
L +KV E+LT + F KA YTVR+F
Sbjct: 242 LWSGSKVFEELTDIERQFHKALYTVRAF 269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,381,541
Number of Sequences: 237096
Number of extensions: 1095214
Number of successful extensions: 2284
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2284
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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