Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17f21
         (389 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   1.6  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    20   8.7  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    20   8.7  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    20   8.7  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    20   8.7  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    20   8.7  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    20   8.7  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    20   8.7  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    20   8.7  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    20   8.7  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    20   8.7  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -2

Query: 349 MFESRHFWDIVVTPLTLLFLKF 284
           MF++ HF+ I+V  +TL+FL F
Sbjct: 1   MFKNYHFFFILV--ITLIFLYF 20


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
          determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35 KEKRKEERTQC 3
          KEK  EERT C
Sbjct: 26 KEKLLEERTSC 36


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
          determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35 KEKRKEERTQC 3
          KEK  EERT C
Sbjct: 26 KEKLLEERTSC 36


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
          determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35 KEKRKEERTQC 3
          KEK  EERT C
Sbjct: 26 KEKLLEERTSC 36


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
          determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35 KEKRKEERTQC 3
          KEK  EERT C
Sbjct: 26 KEKLLEERTSC 36


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35  KEKRKEERTQC 3
           KEK  EERT C
Sbjct: 259 KEKLLEERTSC 269


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35  KEKRKEERTQC 3
           KEK  EERT C
Sbjct: 259 KEKLLEERTSC 269


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35  KEKRKEERTQC 3
           KEK  EERT C
Sbjct: 259 KEKLLEERTSC 269


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35  KEKRKEERTQC 3
           KEK  EERT C
Sbjct: 259 KEKLLEERTSC 269


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35  KEKRKEERTQC 3
           KEK  EERT C
Sbjct: 259 KEKLLEERTSC 269


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 35  KEKRKEERTQC 3
           KEK  EERT C
Sbjct: 248 KEKLLEERTSC 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,302
Number of Sequences: 438
Number of extensions: 1769
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)