Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17f20
         (288 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019865-1|AAH19865.1|  423|Homo sapiens phosphatidylinositol gl...    29   3.6  
BC001803-1|AAH01803.1|  423|Homo sapiens phosphatidylinositol gl...    29   3.6  
AL513302-2|CAH71492.1|  423|Homo sapiens phosphatidylinositol gl...    29   3.6  
AK074655-1|BAC11116.1|  423|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AB028127-1|BAB18567.1|  423|Homo sapiens mannosyltransferase pro...    29   3.6  

>BC019865-1|AAH19865.1|  423|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class M protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 143 YHYYTRFGFWCCRQTDIFIWWNKYCYNHQYWV*FWY 250
           + YY    F C   T IF+ +NK C   QY++  WY
Sbjct: 307 FAYYRDLVFCCFLHTSIFVTFNKVC-TSQYFL--WY 339


>BC001803-1|AAH01803.1|  423|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class M protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 143 YHYYTRFGFWCCRQTDIFIWWNKYCYNHQYWV*FWY 250
           + YY    F C   T IF+ +NK C   QY++  WY
Sbjct: 307 FAYYRDLVFCCFLHTSIFVTFNKVC-TSQYFL--WY 339


>AL513302-2|CAH71492.1|  423|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class M protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 143 YHYYTRFGFWCCRQTDIFIWWNKYCYNHQYWV*FWY 250
           + YY    F C   T IF+ +NK C   QY++  WY
Sbjct: 307 FAYYRDLVFCCFLHTSIFVTFNKVC-TSQYFL--WY 339


>AK074655-1|BAC11116.1|  423|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90174 fis, clone MAMMA1000473, highly similar to
           PIG-M mannosyltransferase. ).
          Length = 423

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 143 YHYYTRFGFWCCRQTDIFIWWNKYCYNHQYWV*FWY 250
           + YY    F C   T IF+ +NK C   QY++  WY
Sbjct: 307 FAYYRDLVFCCFLHTSIFVTFNKVC-TSQYFL--WY 339


>AB028127-1|BAB18567.1|  423|Homo sapiens mannosyltransferase
           protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 143 YHYYTRFGFWCCRQTDIFIWWNKYCYNHQYWV*FWY 250
           + YY    F C   T IF+ +NK C   QY++  WY
Sbjct: 307 FAYYRDLVFCCFLHTSIFVTFNKVC-TSQYFL--WY 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,696,342
Number of Sequences: 237096
Number of extensions: 751894
Number of successful extensions: 665
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 76,859,062
effective HSP length: 72
effective length of database: 59,788,150
effective search space used: 1375127450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)