Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17f17
(473 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 2.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 2.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 2.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 3.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 3.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 3.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 5.1
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 6.7
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 6.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 8.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 8.9
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 241 IRSTLLKQLSKFTLVAYPVWGVPL 312
+RS + +LS LV +PVW V L
Sbjct: 889 LRSLEILRLSGNRLVTFPVWQVTL 912
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 318 KSKKYPLVVDEYEPDTF 368
++K YPL VD++ TF
Sbjct: 66 RTKNYPLDVDQWHNKTF 82
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 2.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 171 LLKDSRKFYWNQRNLTTQD 115
LLKD K +W +R L D
Sbjct: 179 LLKDPVKEFWERRTLQISD 197
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 2.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 171 LLKDSRKFYWNQRNLTTQD 115
LLKD K +W +R L D
Sbjct: 232 LLKDPVKEFWERRTLQISD 250
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.8
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -2
Query: 217 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 44
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.8
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -2
Query: 217 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 44
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.8
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -2
Query: 217 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 44
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.8
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -2
Query: 217 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 44
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.8
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -2
Query: 217 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 44
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.8
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -2
Query: 217 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 44
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 3.8
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -2
Query: 217 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 44
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.8
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -2
Query: 217 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 44
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 3.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 301 PRLDMPLM*TSTTASGVLNGSVINNP 224
P + +P+ STT +GV+ VI P
Sbjct: 827 PYMFLPVSYMSTTMAGVIYPPVIGTP 852
Score = 20.6 bits (41), Expect = 8.9
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 351 YEPDTFDVLKHXINQRFTNGGNKLVNINLSDSDQLLSYSNV 473
+E D+F V KH R + G N+ + + + S V
Sbjct: 707 WEGDSFKVSKHEEVSRTSTAGQFPTNVATTVTSMSIDQSTV 747
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 5.1
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 27 MAATMVSVWVFLISSIIG 80
M + +W+F I+SI+G
Sbjct: 483 MVLDRLFLWIFTIASIVG 500
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 294 SLGSSADFKSKKYPLVVDEYEP 359
S+ + ++ KYP+VV Y P
Sbjct: 5 SVEAVMSLRALKYPMVVHVYHP 26
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 294 SLGSSADFKSKKYPLVVDEYEP 359
S+ + ++ KYP+VV Y P
Sbjct: 5 SVEAVMSLRALKYPMVVHVYHP 26
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 156 ESLLKEIFSASLGLSVEENSEWNGLLITDP 245
+ L KE+ S + G++++ ++ W L DP
Sbjct: 492 QRLRKELDSKTGGVNLKGHAHWLTLHFKDP 521
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 20.6 bits (41), Expect = 8.9
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 151 VLLEPEKLNDSGLWRMLSSPEALIPIIEEIKK 56
V L+P K + S WR L + P + KK
Sbjct: 440 VELQPVKSSKSSGWRKLRNIVHWTPFFQTYKK 471
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,227
Number of Sequences: 438
Number of extensions: 2370
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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