Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17f12
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical p...   136   8e-33
Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical pr...   136   8e-33
Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical pr...   136   8e-33
Z69792-3|CAA93666.1|  284|Caenorhabditis elegans Hypothetical pr...    31   0.74 
Z71177-4|CAA94870.1|  529|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z69384-5|CAA93419.2|  408|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AC006776-5|AAF60625.1|  358|Caenorhabditis elegans Serpentine re...    27   9.1  

>Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score =  136 bits (330), Expect = 8e-33
 Identities = 61/153 (39%), Positives = 101/153 (66%)
 Frame = +1

Query: 91  DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFS 270
           D+S +++PN     +LD++ AF  L+  EK Y+HY+++A+++G L V +Q SPES  IF 
Sbjct: 42  DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFY 101

Query: 271 LLHRVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLPAE 450
           +L+R+F +E +E LK+ AL  G ++ ++QAFLVYA   ++NSGNYKGFGDTK +P +   
Sbjct: 102 VLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVEQT 161

Query: 451 SLELILKASKAYENDNTHILKLWQNTKNAIYGL 549
            +  +L+ S    ++   ++K W++ +  I  L
Sbjct: 162 KIRALLEKSAVGTDEK--VMKTWESVEKVIGSL 192


>Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical
           protein F02E9.9a protein.
          Length = 707

 Score =  136 bits (330), Expect = 8e-33
 Identities = 61/153 (39%), Positives = 101/153 (66%)
 Frame = +1

Query: 91  DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFS 270
           D+S +++PN     +LD++ AF  L+  EK Y+HY+++A+++G L V +Q SPES  IF 
Sbjct: 4   DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFY 63

Query: 271 LLHRVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLPAE 450
           +L+R+F +E +E LK+ AL  G ++ ++QAFLVYA   ++NSGNYKGFGDTK +P +   
Sbjct: 64  VLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVEQT 123

Query: 451 SLELILKASKAYENDNTHILKLWQNTKNAIYGL 549
            +  +L+ S    ++   ++K W++ +  I  L
Sbjct: 124 KIRALLEKSAVGTDEK--VMKTWESVEKVIGSL 154


>Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score =  136 bits (330), Expect = 8e-33
 Identities = 61/153 (39%), Positives = 101/153 (66%)
 Frame = +1

Query: 91  DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFS 270
           D+S +++PN     +LD++ AF  L+  EK Y+HY+++A+++G L V +Q SPES  IF 
Sbjct: 42  DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFY 101

Query: 271 LLHRVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLPAE 450
           +L+R+F +E +E LK+ AL  G ++ ++QAFLVYA   ++NSGNYKGFGDTK +P +   
Sbjct: 102 VLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVEQT 161

Query: 451 SLELILKASKAYENDNTHILKLWQNTKNAIYGL 549
            +  +L+ S    ++   ++K W++ +  I  L
Sbjct: 162 KIRALLEKSAVGTDEK--VMKTWESVEKVIGSL 192


>Z69792-3|CAA93666.1|  284|Caenorhabditis elegans Hypothetical
           protein F40E10.5 protein.
          Length = 284

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = +1

Query: 406 KGFGDTKFIPNLPAESLELILKASKAYENDNTHILKLWQNTKNAIYGL 549
           K  G  KFI  LP+E+ E I K  + Y   NT   K  + T+N I GL
Sbjct: 36  KPCGIPKFINELPSEAAEKITKIWEKYVEGNT-CEKEHEETRNIIRGL 82


>Z71177-4|CAA94870.1|  529|Caenorhabditis elegans Hypothetical
           protein AC3.7 protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 400 NYKGFGDTKFIPNLPAESLELILKASKAYENDNT 501
           NY+ FG  +   N   E L+  L  SKA  N+N+
Sbjct: 55  NYEHFGKIRMAKNTNVEILDYHLDESKAVSNENS 88


>Z69384-5|CAA93419.2|  408|Caenorhabditis elegans Hypothetical
           protein T11G6.8 protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -3

Query: 295 QPQRLYAARRISLVTQDWSVPIL*VHRSMQPDSNNEHIISHSLLDYQKPANYPTPR 128
           +PQ   AA   + VT   SVPIL V   + P ++++   + S+     P  +  PR
Sbjct: 311 EPQAKRAADNSNYVTPVPSVPILPVPDGLAPSTSSQQRFTGSMPRPPAPPTFAAPR 366


>AC006776-5|AAF60625.1|  358|Caenorhabditis elegans Serpentine
           receptor, class w protein90 protein.
          Length = 358

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 182 NFSFVVRLSKACELSNSTNLWLFGSKKFDLSSMMI 78
           NF  +V L++   +++STN+ + G    DLS M+I
Sbjct: 44  NFFHLVVLTRKSMMTSSTNIIMIGIALCDLSCMLI 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,016,396
Number of Sequences: 27780
Number of extensions: 265119
Number of successful extensions: 692
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)