Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17f06
(356 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY236870-1|AAP41817.1| 701|Homo sapiens MUC19 protein. 33 0.26
AK093065-1|BAC04041.1| 280|Homo sapiens protein ( Homo sapiens ... 33 0.26
BC004304-1|AAH04304.1| 320|Homo sapiens uroplakin 3B protein. 29 4.2
AC007078-1|AAS07526.1| 252|Homo sapiens unknown protein. 29 4.2
U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independe... 29 5.6
U41806-1|AAA93299.1| 440|Homo sapiens p60 protein. 29 5.6
BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein. 29 5.6
BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein. 29 5.6
BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein. 29 5.6
BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein. 29 5.6
BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome... 29 5.6
BC074922-1|AAH74922.1| 512|Homo sapiens Kruppel-like factor 11 ... 28 9.8
BC069383-1|AAH69383.1| 512|Homo sapiens Kruppel-like factor 11 ... 28 9.8
BC063286-1|AAH63286.1| 512|Homo sapiens Kruppel-like factor 11 ... 28 9.8
AF272830-1|AAF75793.1| 512|Homo sapiens kruppel-like fetal and ... 28 9.8
AF028008-1|AAC61880.1| 512|Homo sapiens SP1-like zinc finger tr... 28 9.8
AC104794-1|AAX93098.1| 512|Homo sapiens unknown protein. 28 9.8
>AY236870-1|AAP41817.1| 701|Homo sapiens MUC19 protein.
Length = 701
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = -3
Query: 330 TMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASLMLIRMWTRGVSCPGTRGPTWTGD 151
T +A + +TG T G S T +TGVAL+ ++ T + G T G
Sbjct: 129 TTVAPGSSVTGTTTGASDDQVTGSKTGTTGVALSTTVAPGSSSTEATTSTGVHRTTVVGQ 188
Query: 150 GTMGASTRAGPTSG 109
T GA+TR G
Sbjct: 189 KT-GATTRGSAKQG 201
>AK093065-1|BAC04041.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ35746 fis, clone TESTI2004399, moderately
similar to APOMUCIN. ).
Length = 280
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = -3
Query: 330 TMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASLMLIRMWTRGVSCPGTRGPTWTGD 151
T +A + +TG T G S T +TGVAL+ ++ T + G T G
Sbjct: 26 TTVAPGSSVTGTTTGASDDQVTGSKTGTTGVALSTTVAPGSSSTEATTSTGVHRTTVVGQ 85
Query: 150 GTMGASTRAGPTSG 109
T GA+TR G
Sbjct: 86 KT-GATTRGSAKQG 98
>BC004304-1|AAH04304.1| 320|Homo sapiens uroplakin 3B protein.
Length = 320
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTP--LVHIL 211
GPA V P P+P+ +G PG TP + H+L
Sbjct: 46 GPAGVIGPWAPAPLRLGEAAPGTPTPVSVAHLL 78
>AC007078-1|AAS07526.1| 252|Homo sapiens unknown protein.
Length = 252
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTP--LVHIL 211
GPA V P P+P+ +G PG TP + H+L
Sbjct: 46 GPAGVIGPWAPAPLRLGEAAPGTPTPVSVAHLL 78
>U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independent
ligand for the Lck SH2 domain p62 protein.
Length = 440
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTPL-VHILININDAASATPVESVEPEQSNVEEK 286
GP+ E P V +VG V L+PL + + I++ + + V PE S+ EEK
Sbjct: 227 GPS--EDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEEK 281
>U41806-1|AAA93299.1| 440|Homo sapiens p60 protein.
Length = 440
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTPL-VHILININDAASATPVESVEPEQSNVEEK 286
GP+ E P V +VG V L+PL + + I++ + + V PE S+ EEK
Sbjct: 227 GPS--EDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEEK 281
>BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTPL-VHILININDAASATPVESVEPEQSNVEEK 286
GP+ E P V +VG V L+PL + + I++ + + V PE S+ EEK
Sbjct: 227 GPS--EDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEEK 281
>BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTPL-VHILININDAASATPVESVEPEQSNVEEK 286
GP+ E P V +VG V L+PL + + I++ + + V PE S+ EEK
Sbjct: 227 GPS--EDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEEK 281
>BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTPL-VHILININDAASATPVESVEPEQSNVEEK 286
GP+ E P V +VG V L+PL + + I++ + + V PE S+ EEK
Sbjct: 227 GPS--EDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEEK 281
>BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein.
Length = 356
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTPL-VHILININDAASATPVESVEPEQSNVEEK 286
GP+ E P V +VG V L+PL + + I++ + + V PE S+ EEK
Sbjct: 143 GPS--EDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEEK 197
>BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome 1
protein.
Length = 368
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 GPALVEAPIVPSPVHVGPLVPGQLTPL-VHILININDAASATPVESVEPEQSNVEEK 286
GP+ E P V +VG V L+PL + + I++ + + V PE S+ EEK
Sbjct: 155 GPS--EDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEEK 209
>BC074922-1|AAH74922.1| 512|Homo sapiens Kruppel-like factor 11
protein.
Length = 512
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 116 VGPALVEAPIVPSPVHVGPLVPGQLTPLV 202
V P L +A P PV VGP VP LV
Sbjct: 314 VRPILAQAAPAPQPVFVGPAVPQGAVMLV 342
>BC069383-1|AAH69383.1| 512|Homo sapiens Kruppel-like factor 11
protein.
Length = 512
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 116 VGPALVEAPIVPSPVHVGPLVPGQLTPLV 202
V P L +A P PV VGP VP LV
Sbjct: 314 VRPILAQAAPAPQPVFVGPAVPQGAVMLV 342
>BC063286-1|AAH63286.1| 512|Homo sapiens Kruppel-like factor 11
protein.
Length = 512
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 116 VGPALVEAPIVPSPVHVGPLVPGQLTPLV 202
V P L +A P PV VGP VP LV
Sbjct: 314 VRPILAQAAPAPQPVFVGPAVPQGAVMLV 342
>AF272830-1|AAF75793.1| 512|Homo sapiens kruppel-like fetal and
embryonic globin gene activator protein.
Length = 512
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 116 VGPALVEAPIVPSPVHVGPLVPGQLTPLV 202
V P L +A P PV VGP VP LV
Sbjct: 314 VRPILAQAAPAPQPVFVGPAVPQGAVMLV 342
>AF028008-1|AAC61880.1| 512|Homo sapiens SP1-like zinc finger
transcription factor protein.
Length = 512
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 116 VGPALVEAPIVPSPVHVGPLVPGQLTPLV 202
V P L +A P PV VGP VP LV
Sbjct: 314 VRPILAQAAPAPQPVFVGPAVPQGAVMLV 342
>AC104794-1|AAX93098.1| 512|Homo sapiens unknown protein.
Length = 512
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 116 VGPALVEAPIVPSPVHVGPLVPGQLTPLV 202
V P L +A P PV VGP VP LV
Sbjct: 314 VRPILAQAAPAPQPVFVGPAVPQGAVMLV 342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,456,526
Number of Sequences: 237096
Number of extensions: 633906
Number of successful extensions: 2198
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2193
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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