Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17e18
(441 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 47 7e-06
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 47 7e-06
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 43 1e-04
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 43 1e-04
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 43 1e-04
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 43 1e-04
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 43 1e-04
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 42 2e-04
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 36 0.013
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 33 0.070
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 33 0.070
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 33 0.092
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 33 0.092
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 33 0.092
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 32 0.16
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 32 0.16
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 32 0.21
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 31 0.37
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 31 0.49
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 31 0.49
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 31 0.49
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 31 0.49
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 29 1.1
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 28 2.6
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 28 3.5
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 28 3.5
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 27 6.0
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical pr... 27 8.0
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 46.8 bits (106), Expect = 7e-06
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 SRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKDEHGYISR 441
S ++G I D+ KF V LDV HF PE + +K D R + G QE K EHGY+ R
Sbjct: 41 SDNIGEQIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG---IQETKSEHGYLKR 95
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 46.8 bits (106), Expect = 7e-06
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 SRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKDEHGYISR 441
S ++G I D+ KF V LDV HF PE++ ++ D R + G QEKK EHGY R
Sbjct: 41 SDNIGEQIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG---IQEKKSEHGYSKR 95
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 SRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKDEHGYISR 441
S ++G + D+ KF V LDV HF PE++ ++ D R + G QEKK EHGY R
Sbjct: 33 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIELDGRELKIEG---IQEKKSEHGYSKR 86
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 SRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKDEHGYISR 441
S ++G + D+ KF V LDV HF PE++ ++ D R + G QEKK EHGY R
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIELDGRELKIEG---IQEKKSEHGYSKR 94
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 SRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKDEHGYISR 441
S ++G + D+ KF V LDV HF PE++ ++ D R + G QEKK EHGY R
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIELDGRELKIEG---IQEKKSEHGYSKR 94
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 SRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKDEHGYISR 441
S ++G + D+ KF V LDV HF PE++ ++ D R + G QEKK EHGY R
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIELDGRELKIEG---IQEKKSEHGYSKR 94
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 SRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKDEHGYISR 441
S ++G + D+ KF V LDV HF PE + +K D R + G QE K EHGY+ R
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPENLKIKLDGRELKIEG---IQETKSEHGYLKR 94
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 301 DKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKDEHGYISR 441
D+ KF V LDV HF PE + +K D R + G QE K EHGY+ R
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKLDGRELKIEG---IQETKSEHGYLKR 48
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 35.9 bits (79), Expect = 0.013
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 304 KDKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDEHGYISR 441
K+KF+V LDV F+P+EI VK H+ + D HG ++R
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVK-VSGQELLIHCRHETRSDNHGTVAR 75
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 33.5 bits (73), Expect = 0.070
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 244 RPWRQLAAASRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKD 420
R + + S S I + KF +NL+V F PE++ + D R + G QE K
Sbjct: 27 RQFAPVCRISPSESSEIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQG---EQELKT 83
Query: 421 EHGY 432
+HGY
Sbjct: 84 DHGY 87
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 33.5 bits (73), Expect = 0.070
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 244 RPWRQLAAASRDLGSSIKADKDKFQVNLDVXHFSPEEISVK-DCRWVHRGGRAXHQEKKD 420
R + + S S I + KF +NL+V F PE++ + D R + G QE K
Sbjct: 27 RQFAPVCRISPSESSEIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQG---EQELKT 83
Query: 421 EHGY 432
+HGY
Sbjct: 84 DHGY 87
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 33.1 bits (72), Expect = 0.092
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 244 RPWRQLAAASRDLGSSIKADKDKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDE 423
R + + S S I + KF +NL+V F PE++ + H QE K E
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKIN--LDGHTLSIQGEQELKTE 84
Query: 424 HGY 432
HGY
Sbjct: 85 HGY 87
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 33.1 bits (72), Expect = 0.092
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 244 RPWRQLAAASRDLGSSIKADKDKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDE 423
R + + S S I + KF +NL+V F PE++ + H QE K E
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKIN--LDGHTLSIQGEQELKTE 84
Query: 424 HGY 432
HGY
Sbjct: 85 HGY 87
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 33.1 bits (72), Expect = 0.092
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 244 RPWRQLAAASRDLGSSIKADKDKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDE 423
R + + S S I + KF +NL+V F PE++ + H QE K E
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKIN--LDGHTLSIQGEQELKTE 84
Query: 424 HGY 432
HGY
Sbjct: 85 HGY 87
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 32.3 bits (70), Expect = 0.16
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 301 DKDKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDEHGYISR 441
D D F+V L+ +F P+EI VK+ + H KKD G +SR
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLE-IHMEHNVKKDSFGDVSR 75
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 32.3 bits (70), Expect = 0.16
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 301 DKDKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDEHGYISR 441
D D F+V L+ +F P+EI VK+ + H KKD G +SR
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLE-IHMEHNVKKDSFGDVSR 75
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 286 SSIKADKDKFQVNLDVXHFSPEEISV 363
S I DKF VNL+V +F PEE+ V
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKV 68
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 31.1 bits (67), Expect = 0.37
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 277 DLGSSIKADKDKFQVNLDVXHFSPEEISVK 366
D+ S++ D +F V++D F PEEI VK
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVK 131
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 30.7 bits (66), Expect = 0.49
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 286 SSIKADKDKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDEHGYISR 441
+ ++ KF V LDV F PEE+ V H H E K EHG+ R
Sbjct: 44 NEVENTAQKFCVKLDVAAFKPEELKVN--LEGHVLTIEGHHEVKTEHGFSKR 93
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 310 KFQVNLDVXHFSPEEISVK--DCRWVHRGGRAXHQEKKDEHGYISR 441
++ V++DV F PEE+ V D + + G H EK D++G + R
Sbjct: 56 EYNVSVDVSQFEPEELKVNIVDNQLIIEG---KHNEKTDKYGQVER 98
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 310 KFQVNLDVXHFSPEEISVK--DCRWVHRGGRAXHQEKKDEHGYISR 441
++ V++DV F PEE+ V D + + G H EK D++G + R
Sbjct: 55 EYNVSVDVSQFEPEELKVNIVDNQLIIEG---KHNEKTDKYGQVER 97
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 310 KFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDEHGY 432
KF +NL+V F PE++ + H QE K EHGY
Sbjct: 50 KFAINLNVSQFKPEDLKIN--LDGHTLSIQGEQELKTEHGY 88
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 301 DKDKFQVNLDVXHFSPEE 354
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 307 DKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDEHGYISR 441
+KF+V LD F P +I VK + H + E+G ++R
Sbjct: 32 EKFEVGLDAGFFGPNDIDVK-VNGIEIIIHLRHDNRPTEYGIVNR 75
>Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical
protein R04D3.6 protein.
Length = 322
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 47 TFLCVLPYLFKYNQICLFYHSCWVTG 124
T CVLPY+F Y I Y+ C +TG
Sbjct: 243 TIQCVLPYVF-YIPIYTLYYYCLLTG 267
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 304 KDKFQVNLDVXHFSPEEISVKDCRWVHRGGRAXHQEKKDEHGYISR 441
+D F+V L+ +F P EI VK+ A H K D+ G I+R
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMA-HTTKDDKFGSITR 74
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 177 SKILINKTTGPVVVTNAGPVTQHEW*KRHIWLYLNRYGKTQRKVRLNASQ 28
+++ +N+TTG VVT P Q I +Y N+YG+ RK N Q
Sbjct: 637 NRVAVNRTTGDFVVTERSPTHQ-------IQVY-NQYGQFLRKFGANILQ 678
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 177 SKILINKTTGPVVVTNAGPVTQHEW*KRHIWLYLNRYGKTQRKVRLNASQ 28
+++ +N+TTG VVT P Q I +Y N+YG+ RK N Q
Sbjct: 637 NRVAVNRTTGDFVVTERSPTHQ-------IQVY-NQYGQFLRKFGANILQ 678
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 313 FQVNLDVXHFSPEEISV 363
F + +DV HF PEEI V
Sbjct: 104 FTIEIDVFHFMPEEIKV 120
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 313 FQVNLDVXHFSPEEISV 363
F + +DV HF PEEI V
Sbjct: 104 FTIEIDVFHFMPEEIKV 120
>Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical
protein Y48E1B.8 protein.
Length = 383
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 121 WPRVRHNHWPSRLVDQDFGLA 183
WPR+R HWP+ + + F A
Sbjct: 126 WPRIRVFHWPTPSLYKPFSFA 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,525,221
Number of Sequences: 27780
Number of extensions: 214949
Number of successful extensions: 587
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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