Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17e13
         (382 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF212228-1|AAK14914.1|  755|Homo sapiens CCP8 protein.                 29   3.8  
AF011794-1|AAB69314.1|  375|Homo sapiens cell cycle progression ...    29   3.8  

>AF212228-1|AAK14914.1|  755|Homo sapiens CCP8 protein.
          Length = 755

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -2

Query: 222 FSWLISLLLNKGINDICRYNNVLGSINKY---*VVVHTYIHFTKFINGVK 82
           F  +I   + K ++  CR+N +   INK+    V +H    FT F+N VK
Sbjct: 654 FRQIIQRYMLKELDTFCRWNELDQFINKFFLNGVFIHDQKLFTDFVNDVK 703


>AF011794-1|AAB69314.1|  375|Homo sapiens cell cycle progression
           restoration 8 protein protein.
          Length = 375

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -2

Query: 222 FSWLISLLLNKGINDICRYNNVLGSINKY---*VVVHTYIHFTKFINGVK 82
           F  +I   + K ++  CR+N +   INK+    V +H    FT F+N VK
Sbjct: 274 FRQIIQRYMLKELDTFCRWNELDQFINKFFLNGVFIHDQKLFTDFVNDVK 323


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,487,347
Number of Sequences: 237096
Number of extensions: 860571
Number of successful extensions: 4763
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4763
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)