Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17e13
         (382 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022652-1|AAY55068.1|  538|Drosophila melanogaster IP12095p pro...    28   3.5  
BT022217-1|AAY54633.1|  538|Drosophila melanogaster IP12395p pro...    28   3.5  
AE014297-4620|AAN14239.2|  536|Drosophila melanogaster CG31524-P...    28   3.5  
AE014297-4619|ABI31221.1|  535|Drosophila melanogaster CG31524-P...    28   3.5  
AE014134-2170|AAF53173.4|  475|Drosophila melanogaster CG17213-P...    27   8.2  

>BT022652-1|AAY55068.1|  538|Drosophila melanogaster IP12095p
           protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +2

Query: 95  INLVKCMYVCTTT*YLFIEPRTLLYLQISLIPLFNSKLISHEKCVINRSLFK*QV 259
           +N + C+Y C T  +L + P     L +    +    ++SH++  + RS  K Q+
Sbjct: 301 LNRLYCVYNCVTAPFLRLAPIKTEILSVDPFVILLHDMVSHKEGALIRSSSKNQI 355


>BT022217-1|AAY54633.1|  538|Drosophila melanogaster IP12395p
           protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +2

Query: 95  INLVKCMYVCTTT*YLFIEPRTLLYLQISLIPLFNSKLISHEKCVINRSLFK*QV 259
           +N + C+Y C T  +L + P     L +    +    ++SH++  + RS  K Q+
Sbjct: 301 LNRLYCVYNCVTAPFLRLAPIKTEILSVDPFVILLHDMVSHKEGALIRSSSKNQI 355


>AE014297-4620|AAN14239.2|  536|Drosophila melanogaster CG31524-PA,
           isoform A protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +2

Query: 95  INLVKCMYVCTTT*YLFIEPRTLLYLQISLIPLFNSKLISHEKCVINRSLFK*QV 259
           +N + C+Y C T  +L + P     L +    +    ++SH++  + RS  K Q+
Sbjct: 299 LNRLYCVYNCVTAPFLRLAPIKTEILSVDPFVILLHDMVSHKEGALIRSSSKNQI 353


>AE014297-4619|ABI31221.1|  535|Drosophila melanogaster CG31524-PB,
           isoform B protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +2

Query: 95  INLVKCMYVCTTT*YLFIEPRTLLYLQISLIPLFNSKLISHEKCVINRSLFK*QV 259
           +N + C+Y C T  +L + P     L +    +    ++SH++  + RS  K Q+
Sbjct: 298 LNRLYCVYNCVTAPFLRLAPIKTEILSVDPFVILLHDMVSHKEGALIRSSSKNQI 352


>AE014134-2170|AAF53173.4|  475|Drosophila melanogaster CG17213-PA
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 101 LVKCMYVCTTT*YLFIEPRTLLYLQISLIPLFNSK 205
           L  C  VC  + +LF+     LYL I+L+ L+  K
Sbjct: 58  LDSCNSVCKLSSHLFMHLGAFLYLTITLLSLYRRK 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,480
Number of Sequences: 53049
Number of extensions: 263052
Number of successful extensions: 471
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)