Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17e07
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 121 2e-28
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 51 5e-07
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 51 5e-07
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 43 1e-04
Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical pr... 29 1.8
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 29 2.3
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 27 5.4
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 27 5.4
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 27 7.1
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 121 bits (292), Expect = 2e-28
Identities = 53/104 (50%), Positives = 74/104 (71%)
Frame = +2
Query: 173 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 352
Q+V+ ++ + +P YK +L+T+G Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2 QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60
Query: 353 NAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVXYLV 484
NAAL +Q LWHTT++Y IYEY E+L +K P LN + V
Sbjct: 61 NAALTEQAQKLWHTTSIYHTEPIYEYAEKLLSKFPSKLNSVFFV 104
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 50.8 bits (116), Expect = 5e-07
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +2
Query: 236 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 415
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 416 KIYEYVEQLAAKL 454
+ EY E+ KL
Sbjct: 100 VLGEY-EEYVTKL 111
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 50.8 bits (116), Expect = 5e-07
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +2
Query: 236 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 415
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 416 KIYEYVEQLAAKL 454
+ EY E+ KL
Sbjct: 100 VLGEY-EEYVTKL 111
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 236 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 412
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 413 PKIYEYVEQLAAKLPG 460
++ + EQ+ + LPG
Sbjct: 106 TQLTDCAEQILSTLPG 121
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 236 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 412
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 413 PKIYEYVEQLAAKLPG 460
++ + EQ+ + LPG
Sbjct: 106 TQLTDCAEQILSTLPG 121
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 236 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 400
PV L++G +++D +GK+Y D V+ GHCHPK+ LKD V+ N
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91
>Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical
protein T26F2.3 protein.
Length = 316
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +2
Query: 257 HMQWLYDNDGKRYLDLF-GGIVTVSVGH-----C---HPKVNAALKDQLDVLWHTTNLYR 409
H +WL+ N K Y F G + T+ +G C K+ + ++DV W N
Sbjct: 205 HGKWLHWNSQKHYFQSFLGNVPTILIGRKDQNDCVYQVDKIKTSEIPKMDVKWKVQNCL- 263
Query: 410 HPKIYEYVEQLAAKLPGD 463
+++ + ++ +KLP D
Sbjct: 264 -AQLFTVLNKIMSKLPDD 280
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 122 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 238
K+ P + P+ G YQQ++Q PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 196 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 68
SFH L R+R R R R + RSDDV A S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 45 QQRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 179
++R S+ ++ + ++S R R K RRR DR+RD R K
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 174 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 61
W+ G + G+G + GG+LA L ++ S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 347 KVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAK 451
K ++ +D++ V W T + R P IY+ + L K
Sbjct: 343 KPSSQCEDRITVCWWTADRCRSPAIYQVMSSLCPK 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,267,641
Number of Sequences: 27780
Number of extensions: 277195
Number of successful extensions: 887
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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