BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17e05
(558 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15220-1|AAA61796.1| 1051|Drosophila melanogaster gp150 protein ... 89 3e-18
BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p pro... 89 3e-18
BT011025-1|AAR30185.1| 1051|Drosophila melanogaster RE46351p pro... 89 3e-18
AY029705-1|AAK39644.1| 1051|Drosophila melanogaster leucine rich... 89 3e-18
AE013599-3379|AAG22195.1| 1051|Drosophila melanogaster CG5820-PC... 89 3e-18
AE013599-3378|AAM68222.1| 1051|Drosophila melanogaster CG5820-PB... 89 3e-18
AE013599-3377|AAF46831.1| 1051|Drosophila melanogaster CG5820-PA... 89 3e-18
AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD... 89 3e-18
AF247768-1|AAF86228.1| 809|Drosophila melanogaster Toll-4 protein. 31 1.4
AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-P... 31 1.4
>U15220-1|AAA61796.1| 1051|Drosophila melanogaster gp150 protein
protein.
Length = 1051
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 259 DADNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVS-QGYRQAKCSFLEIGTQKFGDDI 435
D D+ D D + ++V+++ED PCPR C C+ + Y A CS L++G QKFG DI
Sbjct: 206 DDDDDEDDAADDLLTDDEQVVFSEDVPCPRFCQCARNVNSYLVATCSRLDMGIQKFGSDI 265
Query: 436 LDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGY 558
DLVV N P+YPI + F+ LGL VA++KI N T+ Y
Sbjct: 266 TDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEY 306
>BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p
protein.
Length = 1076
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 259 DADNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVS-QGYRQAKCSFLEIGTQKFGDDI 435
D D+ D D + ++V+++ED PCPR C C+ + Y A CS L++G QKFG DI
Sbjct: 231 DDDDDEDDAADDLLTDDEQVVFSEDVPCPRFCQCARNVNSYLVATCSRLDMGIQKFGSDI 290
Query: 436 LDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGY 558
DLVV N P+YPI + F+ LGL VA++KI N T+ Y
Sbjct: 291 TDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEY 331
>BT011025-1|AAR30185.1| 1051|Drosophila melanogaster RE46351p
protein.
Length = 1051
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 259 DADNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVS-QGYRQAKCSFLEIGTQKFGDDI 435
D D+ D D + ++V+++ED PCPR C C+ + Y A CS L++G QKFG DI
Sbjct: 206 DDDDDEDDAADDLLTDDEQVVFSEDVPCPRFCQCARNVNSYLVATCSRLDMGIQKFGSDI 265
Query: 436 LDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGY 558
DLVV N P+YPI + F+ LGL VA++KI N T+ Y
Sbjct: 266 TDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEY 306
>AY029705-1|AAK39644.1| 1051|Drosophila melanogaster leucine rich
repeat protein GP150 protein.
Length = 1051
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 259 DADNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVS-QGYRQAKCSFLEIGTQKFGDDI 435
D D+ D D + ++V+++ED PCPR C C+ + Y A CS L++G QKFG DI
Sbjct: 206 DDDDDEDDAADDLLTDDEQVVFSEDVPCPRFCQCARNVNSYLVATCSRLDMGIQKFGSDI 265
Query: 436 LDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGY 558
DLVV N P+YPI + F+ LGL VA++KI N T+ Y
Sbjct: 266 TDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEY 306
>AE013599-3379|AAG22195.1| 1051|Drosophila melanogaster CG5820-PC,
isoform C protein.
Length = 1051
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 259 DADNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVS-QGYRQAKCSFLEIGTQKFGDDI 435
D D+ D D + ++V+++ED PCPR C C+ + Y A CS L++G QKFG DI
Sbjct: 206 DDDDDEDDAADDLLTDDEQVVFSEDVPCPRFCQCARNVNSYLVATCSRLDMGIQKFGSDI 265
Query: 436 LDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGY 558
DLVV N P+YPI + F+ LGL VA++KI N T+ Y
Sbjct: 266 TDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEY 306
>AE013599-3378|AAM68222.1| 1051|Drosophila melanogaster CG5820-PB,
isoform B protein.
Length = 1051
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 259 DADNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVS-QGYRQAKCSFLEIGTQKFGDDI 435
D D+ D D + ++V+++ED PCPR C C+ + Y A CS L++G QKFG DI
Sbjct: 206 DDDDDEDDAADDLLTDDEQVVFSEDVPCPRFCQCARNVNSYLVATCSRLDMGIQKFGSDI 265
Query: 436 LDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGY 558
DLVV N P+YPI + F+ LGL VA++KI N T+ Y
Sbjct: 266 TDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEY 306
>AE013599-3377|AAF46831.1| 1051|Drosophila melanogaster CG5820-PA,
isoform A protein.
Length = 1051
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 259 DADNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVS-QGYRQAKCSFLEIGTQKFGDDI 435
D D+ D D + ++V+++ED PCPR C C+ + Y A CS L++G QKFG DI
Sbjct: 206 DDDDDEDDAADDLLTDDEQVVFSEDVPCPRFCQCARNVNSYLVATCSRLDMGIQKFGSDI 265
Query: 436 LDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGY 558
DLVV N P+YPI + F+ LGL VA++KI N T+ Y
Sbjct: 266 TDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEY 306
>AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD,
isoform D protein.
Length = 1076
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 259 DADNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVS-QGYRQAKCSFLEIGTQKFGDDI 435
D D+ D D + ++V+++ED PCPR C C+ + Y A CS L++G QKFG DI
Sbjct: 231 DDDDDEDDAADDLLTDDEQVVFSEDVPCPRFCQCARNVNSYLVATCSRLDMGIQKFGSDI 290
Query: 436 LDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGY 558
DLVV N P+YPI + F+ LGL VA++KI N T+ Y
Sbjct: 291 TDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEY 331
>AF247768-1|AAF86228.1| 809|Drosophila melanogaster Toll-4 protein.
Length = 809
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +1
Query: 292 YEPAEYQEVLYN---EDRPCPRDCICSV 366
+EP EY+ VL D CP DCIC V
Sbjct: 417 HEPMEYETVLRRVEITDDKCPEDCICCV 444
>AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-PA
protein.
Length = 1125
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +1
Query: 292 YEPAEYQEVLYN---EDRPCPRDCICSV 366
+EP EY+ VL D CP DCIC V
Sbjct: 733 HEPMEYETVLRRVEITDDKCPEDCICCV 760
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,367,301
Number of Sequences: 53049
Number of extensions: 517015
Number of successful extensions: 1519
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -