Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17e04
(465 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 83 8e-17
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 82 2e-16
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 81 6e-16
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 80 1e-15
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 49 2e-06
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 49 2e-06
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 49 2e-06
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 41 6e-04
06_03_1255 + 28780181-28781172,28782065-28782932 38 0.004
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 37 0.007
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 37 0.009
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 36 0.012
08_01_0397 - 3509186-3510291,3510322-3512335 34 0.049
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 34 0.049
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 34 0.065
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 33 0.086
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 33 0.086
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 33 0.11
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 33 0.11
03_05_0865 - 28365430-28367640 32 0.20
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 32 0.26
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 31 0.46
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 31 0.46
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 31 0.60
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 30 1.1
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 30 1.1
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 29 1.4
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 29 1.4
08_02_0230 - 14572854-14574632 29 1.8
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 29 1.8
02_02_0619 - 12205718-12205845,12205941-12206142,12207240-122073... 29 2.4
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 28 3.2
08_02_0445 + 17218136-17218333,17219595-17219725,17219908-17220112 27 9.8
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 27 9.8
02_05_0133 - 26117998-26118243,26118320-26119592,26120773-26121080 27 9.8
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 83.4 bits (197), Expect = 8e-17
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Frame = +3
Query: 276 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR 446
GP MD L + +V+ +FD M ++E+LLRGIYAYGFEKPSAIQQRA++P I GR
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGR 69
Query: 447 DVIAQA 464
DVIAQA
Sbjct: 70 DVIAQA 75
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 82.2 bits (194), Expect = 2e-16
Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Frame = +3
Query: 276 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR 446
GP MD L + +V+ +FD M ++++LLRGIYAYGFEKPSAIQQRA++P I GR
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGR 69
Query: 447 DVIAQA 464
DVIAQA
Sbjct: 70 DVIAQA 75
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 80.6 bits (190), Expect = 6e-16
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +3
Query: 309 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I+P +G DVI QA
Sbjct: 34 TSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 85
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +3
Query: 309 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I+P +G DVI QA
Sbjct: 34 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 85
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
F+D LK ELL GIY GFE+PS IQ+ +I + G D++A+A
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA 191
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
F+D LK ELL GIY GFE+PS IQ+ +I + G D++A+A
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA 168
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
F+D LK ELL GIY GFE+PS IQ+ +I + G D++A+A
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA 178
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 40.7 bits (91), Expect = 6e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 216 SEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVE-TFDDMNLKEELLRGIYAYGF 392
+E+ E G +G +GP G + ++ E +FD++ L E+L R + G
Sbjct: 45 AEEGVEREGGGEGGAEGE-EGPDAAARGGEEGKEEEEREVSFDELGLDEQLKRALRKKGL 103
Query: 393 EKPSAIQQRAIMPCIQGRDVIAQA 464
+K + IQ+ AI ++G+DV+A+A
Sbjct: 104 DKATPIQREAIPLILEGKDVVAKA 127
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
+F D+ L E +LR + G EKP+ IQ + + + GRD+I A
Sbjct: 174 SFGDLRLPEPILRALRGKGIEKPTPIQVQGLPVALSGRDMIGIA 217
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
+F ++NL LLR A G++KP+ IQ I + GRD+ A
Sbjct: 195 SFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSA 238
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 312 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
D + +++F D +L+ I G+EKP+ IQ +A+ + GRD+I A
Sbjct: 213 DVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIA 263
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
F+ M L EE+ RG+ G+ P+ IQ++A+ + G D+ A A
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMA 70
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 34.3 bits (75), Expect = 0.049
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 312 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
D + ++T+ L +LL I GFEKP +IQ +A+ + GRD I A
Sbjct: 418 DVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIA 468
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 34.3 bits (75), Expect = 0.049
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVI 455
+F ++ +E+L + ++GF +PS IQ A P ++G+ I
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCI 281
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 33.9 bits (74), Expect = 0.065
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 210 RRSEDWPEDSKNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAY 386
++S+D E +G +KD S ++ T D +V T + E L+
Sbjct: 623 QKSDD--ESGGDGNNKDSNSIAPSAIAINSKKKQTTKD-IVTTQGAQFISESLIGETQTK 679
Query: 387 GFEKPSAIQQRAIMPCIQGRDVIAQA 464
+KPSA+ QR I+P G D+I Q+
Sbjct: 680 DLDKPSAVHQRGIVPLCNGLDIIQQS 705
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 33.5 bits (73), Expect = 0.086
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
TF+ E+L+ I+A GF P+ IQ + +Q RD++A A
Sbjct: 605 TFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIA 648
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 33.5 bits (73), Expect = 0.086
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 312 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
D + ++T+ L +LL I GFEKP IQ +A+ + GRD I A
Sbjct: 279 DVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIA 329
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 324 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
V TF ++ L + L+ + G P+A+Q+R I ++GRDV+ A
Sbjct: 75 VPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIA 121
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 33.1 bits (72), Expect = 0.11
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Frame = +3
Query: 240 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGF 392
++G S G GPP +D T V E+ F+D+ L ELL+G++ GF
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 393 EKPSAIQQRAIMPCI---QGRDVIAQA 464
+PS I Q +P I +D+IAQA
Sbjct: 122 SRPSKI-QAVTLPMILTPPYKDLIAQA 147
>03_05_0865 - 28365430-28367640
Length = 736
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
+ + L ELLR + G+++PS IQ +I +Q RDVI A
Sbjct: 317 WSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIA 359
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
F+ L E +LR + G+E P+ +Q+ ++ + GRD++A A
Sbjct: 86 FEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACA 128
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 31.1 bits (67), Expect = 0.46
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
V TF +++L + L I + KP+ +Q+ AI I GRD++A A
Sbjct: 236 VNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACA 281
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 31.1 bits (67), Expect = 0.46
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
TF E+LR + GF P+ IQ ++ ++ RD++A A
Sbjct: 181 TFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRDIVAVA 224
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
FD + L+ + G+E+ + +Q+ + +QG+DV+A+A
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKA 50
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 228 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 323
P ++ GPS+DQ + + PP + PG D W Q
Sbjct: 392 PAVTETGPSRDQPAEE-PPAVTPGANDGFWQQ 422
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
FD + L+ I G+EK + +Q+ + +QG DV+A+A
Sbjct: 76 FDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKA 118
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
FD++ L + G+ G+ + S IQ+ A+ + GRDV+ A
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAA 124
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
TF +++L + L I + KP+ +Q+ AI I GRD++A A
Sbjct: 324 TFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACA 367
>08_02_0230 - 14572854-14574632
Length = 592
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 193 CLIRLKEGQKIGQRIPKMGHRRIKVVTMDLREWTLGHLTPTGIKLSKPSMT*TSKKNC 366
C +RL + QK+ P++ R++ VT R G + I L P++T + NC
Sbjct: 219 CTVRLCDLQKVILAAPRLAELRLESVTFSDRPPLSGFIFDEHIHLHCPAVTSFTMVNC 276
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 29.1 bits (62), Expect = 1.8
Identities = 9/43 (20%), Positives = 26/43 (60%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
F++ + ++ + G+ + + +Q+ A+ C++G+DV+ +A
Sbjct: 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKA 386
>02_02_0619 -
12205718-12205845,12205941-12206142,12207240-12207315,
12208073-12208278
Length = 203
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 428 HYCALLDCRRFFKTIGVYASQQFFFEVHVIEG 333
++C +L C+R + G +++QQ FF +I G
Sbjct: 118 YHCNILGCKRLNDSTGEHSTQQRFFVELIING 149
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 464
+ +F+ E+L+ I GF P+ IQ ++ +Q +DV+A A
Sbjct: 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIA 194
>08_02_0445 + 17218136-17218333,17219595-17219725,17219908-17220112
Length = 177
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 142 LNLTLLVLFRSATAVETCLIRLKEG 216
LNLT L+L + +ETCL++ G
Sbjct: 149 LNLTYLILDLNTLTMETCLVKSSAG 173
>07_03_0918 - 22581625-22581687,22581773-22581868,22581980-22582268,
22582341-22582477,22582567-22582683,22583277-22583440,
22583542-22583756,22583838-22584004,22584206-22584559,
22584647-22584795,22584907-22585030,22585132-22585371,
22585723-22586140,22586297-22586920,22586999-22587183,
22587302-22587412,22587583-22587789,22587869-22587967,
22588063-22588159,22588296-22588384,22588495-22588548,
22588671-22588793,22588872-22588940,22589020-22589089,
22589202-22589260,22589367-22589570,22590032-22590060,
22590375-22590433,22590513-22590634,22591637-22591830,
22591974-22592088
Length = 1680
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 306 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 404
D+DW+ ++++ D + + L + + GF+KP+
Sbjct: 1310 DSDWETLLKSIRDASYTTQPLELLNSVGFQKPN 1342
>02_05_0133 - 26117998-26118243,26118320-26119592,26120773-26121080
Length = 608
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 243 NGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 407
N P K +G P + +TD D++ + D ++ ++ Y F+KP+A
Sbjct: 523 NAPDKKVEGSEGEPNVTAAAEETDSDEMCGEYTDDGDDDDKMQ--YKIEFQKPTA 575
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,371,613
Number of Sequences: 37544
Number of extensions: 233377
Number of successful extensions: 675
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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