Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17e01
(592 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 258 8e-69
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 258 8e-69
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 258 8e-69
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 258 8e-69
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 258 8e-69
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 258 8e-69
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 256 3e-68
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 1e-48
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 155 8e-38
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 36 0.081
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 258 bits (633), Expect = 8e-69
Identities = 119/170 (70%), Positives = 133/170 (78%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 442
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 443 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDGG 592
EYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVDGG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 170
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 258 bits (633), Expect = 8e-69
Identities = 119/170 (70%), Positives = 133/170 (78%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 442
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 443 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDGG 592
EYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVDGG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 170
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 258 bits (633), Expect = 8e-69
Identities = 119/170 (70%), Positives = 133/170 (78%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 442
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 443 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDGG 592
EYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVDGG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 170
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 258 bits (633), Expect = 8e-69
Identities = 119/170 (70%), Positives = 133/170 (78%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 442
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 443 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDGG 592
EYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVDGG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 170
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 258 bits (633), Expect = 8e-69
Identities = 119/170 (70%), Positives = 133/170 (78%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 442
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 443 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDGG 592
EYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVDGG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 170
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 258 bits (633), Expect = 8e-69
Identities = 119/170 (70%), Positives = 133/170 (78%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 442
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 443 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDGG 592
EYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVDGG
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 177
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 256 bits (628), Expect = 3e-68
Identities = 118/170 (69%), Positives = 132/170 (77%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 442
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 443 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDGG 592
EYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVDGG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 170
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 192 bits (467), Expect = 1e-48
Identities = 84/98 (85%), Positives = 95/98 (96%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 376
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 155 bits (377), Expect = 8e-38
Identities = 72/120 (60%), Positives = 84/120 (70%)
Frame = +2
Query: 233 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 412
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 413 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDGG 592
EYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 36.3 bits (80), Expect = 0.081
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 539 TTTGARVFGAMKGAVDGG 592
TTTG +VFGA+KGAVDGG
Sbjct: 1 TTTGNKVFGALKGAVDGG 18
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,237,050
Number of Sequences: 237096
Number of extensions: 1788658
Number of successful extensions: 3318
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3309
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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