Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17d23
(488 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047879-1|AAH47879.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 84 2e-16
BC039830-1|AAH39830.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 84 2e-16
BC032671-1|AAH32671.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 84 2e-16
BC025270-1|AAH25270.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 84 2e-16
BC017274-1|AAH17274.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 84 2e-16
BC017204-1|AAH17204.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 84 2e-16
D86987-1|BAA34389.2| 790|Homo sapiens KIAA0214 protein protein. 29 8.6
BC051789-1|AAH51789.1| 525|Homo sapiens LOC129293 protein protein. 29 8.6
BC017061-1|AAH17061.1| 757|Homo sapiens mitofusin 2 protein. 29 8.6
AY028429-1|AAK18728.1| 757|Homo sapiens mitochondrial assembly ... 29 8.6
AL096840-9|CAI19088.2| 436|Homo sapiens mitofusin 2 protein. 29 8.6
AL096840-8|CAI19087.2| 757|Homo sapiens mitofusin 2 protein. 29 8.6
>BC047879-1|AAH47879.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 84.2 bits (199), Expect = 2e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 240 MLTPRFKLTQDDNHIFVTVHAPYTNIGDTEIDVDGENFLFVSSPYFLRLRLPGRIVDDDR 419
MLTP F L+QD + + + + PY + + ++ +G +F F + PYFLRL LPGRIV++
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 420 AKGSYTCDSGDFNLTFEKETAGE 488
+GSY D G F + KET G+
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQ 83
>BC039830-1|AAH39830.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 84.2 bits (199), Expect = 2e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 240 MLTPRFKLTQDDNHIFVTVHAPYTNIGDTEIDVDGENFLFVSSPYFLRLRLPGRIVDDDR 419
MLTP F L+QD + + + + PY + + ++ +G +F F + PYFLRL LPGRIV++
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 420 AKGSYTCDSGDFNLTFEKETAGE 488
+GSY D G F + KET G+
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQ 83
>BC032671-1|AAH32671.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 84.2 bits (199), Expect = 2e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 240 MLTPRFKLTQDDNHIFVTVHAPYTNIGDTEIDVDGENFLFVSSPYFLRLRLPGRIVDDDR 419
MLTP F L+QD + + + + PY + + ++ +G +F F + PYFLRL LPGRIV++
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 420 AKGSYTCDSGDFNLTFEKETAGE 488
+GSY D G F + KET G+
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQ 83
>BC025270-1|AAH25270.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 84.2 bits (199), Expect = 2e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 240 MLTPRFKLTQDDNHIFVTVHAPYTNIGDTEIDVDGENFLFVSSPYFLRLRLPGRIVDDDR 419
MLTP F L+QD + + + + PY + + ++ +G +F F + PYFLRL LPGRIV++
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 420 AKGSYTCDSGDFNLTFEKETAGE 488
+GSY D G F + KET G+
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQ 83
>BC017274-1|AAH17274.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 84.2 bits (199), Expect = 2e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 240 MLTPRFKLTQDDNHIFVTVHAPYTNIGDTEIDVDGENFLFVSSPYFLRLRLPGRIVDDDR 419
MLTP F L+QD + + + + PY + + ++ +G +F F + PYFLRL LPGRIV++
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 420 AKGSYTCDSGDFNLTFEKETAGE 488
+GSY D G F + KET G+
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQ 83
>BC017204-1|AAH17204.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 84.2 bits (199), Expect = 2e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 240 MLTPRFKLTQDDNHIFVTVHAPYTNIGDTEIDVDGENFLFVSSPYFLRLRLPGRIVDDDR 419
MLTP F L+QD + + + + PY + + ++ +G +F F + PYFLRL LPGRIV++
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 420 AKGSYTCDSGDFNLTFEKETAGE 488
+GSY D G F + KET G+
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQ 83
>D86987-1|BAA34389.2| 790|Homo sapiens KIAA0214 protein protein.
Length = 790
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 247 VSMMYTIDLLVRHQLPLFSIKTDCDAVKQWTDSQKSNKFVTSVPWT*YILRF 92
VS+ ID+LV Q FS+ D + K D Q+ +F S+ WT + RF
Sbjct: 540 VSVRSQIDMLVPRQC--FSLNYDLNCDKLCADFQEDIEFHFSLGWTMLVNRF 589
>BC051789-1|AAH51789.1| 525|Homo sapiens LOC129293 protein protein.
Length = 525
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 276 NHIFVTVHAPYTNIGDTEIDVDGENFLFVSSPYF 377
++ F T+H PYT + D D E FL S YF
Sbjct: 122 SYFFGTIHVPYTRVWDFIPDNSKEAFLQSSIVYF 155
>BC017061-1|AAH17061.1| 757|Homo sapiens mitofusin 2 protein.
Length = 757
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 247 VSMMYTIDLLVRHQLPLFSIKTDCDAVKQWTDSQKSNKFVTSVPWT*YILRF 92
VS+ ID+LV Q FS+ D + K D Q+ +F S+ WT + RF
Sbjct: 507 VSVRSQIDMLVPRQC--FSLNYDLNCDKLCADFQEDIEFHFSLGWTMLVNRF 556
>AY028429-1|AAK18728.1| 757|Homo sapiens mitochondrial assembly
regulatory factor protein.
Length = 757
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 247 VSMMYTIDLLVRHQLPLFSIKTDCDAVKQWTDSQKSNKFVTSVPWT*YILRF 92
VS+ ID+LV Q FS+ D + K D Q+ +F S+ WT + RF
Sbjct: 507 VSVRSQIDMLVPRQC--FSLNYDLNCDKLCADFQEDIEFHFSLGWTMLVNRF 556
>AL096840-9|CAI19088.2| 436|Homo sapiens mitofusin 2 protein.
Length = 436
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 247 VSMMYTIDLLVRHQLPLFSIKTDCDAVKQWTDSQKSNKFVTSVPWT*YILRF 92
VS+ ID+LV Q FS+ D + K D Q+ +F S+ WT + RF
Sbjct: 205 VSVRSQIDMLVPRQC--FSLNYDLNCDKLCADFQEDIEFHFSLGWTMLVNRF 254
>AL096840-8|CAI19087.2| 757|Homo sapiens mitofusin 2 protein.
Length = 757
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 247 VSMMYTIDLLVRHQLPLFSIKTDCDAVKQWTDSQKSNKFVTSVPWT*YILRF 92
VS+ ID+LV Q FS+ D + K D Q+ +F S+ WT + RF
Sbjct: 507 VSVRSQIDMLVPRQC--FSLNYDLNCDKLCADFQEDIEFHFSLGWTMLVNRF 556
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,778,497
Number of Sequences: 237096
Number of extensions: 1367190
Number of successful extensions: 3063
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3063
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -