Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17d21
(471 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 3.8
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 3.8
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.8
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 356 YLQKYYFLMMK 388
YLQKY++L M+
Sbjct: 534 YLQKYFYLFME 544
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 356 YLQKYYFLMMK 388
YLQKY++L M+
Sbjct: 534 YLQKYFYLFME 544
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNPLSNNYNYNNNYNNYNKHNYNKLYYN 112
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 112
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 112
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 112
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 112
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 112
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 112
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 112
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 112
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 345
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 334 NNSXIXKLFTKILFFNDENKXNLNXXYXN 420
NN+ + + +N+ NK N N Y N
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHNYNKLYYN 345
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,623
Number of Sequences: 438
Number of extensions: 743
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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