Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17d16
(367 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 2.0
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 2.6
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 2.6
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 3.4
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 21 3.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 6.0
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 6.0
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 8.0
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 8.0
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 20 8.0
AY078399-1|AAL83702.1| 31|Apis mellifera major royal jelly pro... 20 8.0
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 20 8.0
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 8.0
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 2.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 262 HLHQVKLHKRDNKHTFQRVWRDAQ 191
++ +VK K +KH Q W D +
Sbjct: 325 YIPKVKNKKAGSKHLLQNTWLDPE 348
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 2.6
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +1
Query: 181 PKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPSAV 312
P N A A KCA L E A C+ K + +P V
Sbjct: 153 PMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVISISPDLV 196
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 2.6
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +1
Query: 43 VFKNFKMKTLIFIMLVACVASAAYGAL 123
+FK FK + +++++ AC+ + L
Sbjct: 431 LFKTFKDRKYLYMLMEACLGGELWTVL 457
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +1
Query: 199 RARHAGKCACCPACVTLLGEGAT 267
+ RH CC C L G G++
Sbjct: 3 KGRHVVMSCCCWCCDNLGGPGSS 25
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 21.4 bits (43), Expect = 3.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 310 VCKEPLKCIKRVCTKL 357
+ K PL+C+ R CT +
Sbjct: 106 ITKAPLECMCRPCTSV 121
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 20.6 bits (41), Expect = 6.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 69 VDFYNAGGMRCVSSVRCFGMWYRL 140
+D YNA M S+V M YR+
Sbjct: 176 LDVYNADIMAATSNVIIASMQYRV 199
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 20.6 bits (41), Expect = 6.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 69 VDFYNAGGMRCVSSVRCFGMWYRL 140
+D YNA M S+V M YR+
Sbjct: 176 LDVYNADIMAATSNVIIASMQYRV 199
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 20.2 bits (40), Expect = 8.0
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 40 NVFKNFKMKTLIFIMLVACVASAAYGALVCGTDYCEK 150
N F + + F+ L+ S A LVC Y ++
Sbjct: 18 NTFSLLSVLLVGFLFLILIFLSVAGNILVCVAIYTDR 54
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 128 HTKAPYAADATHATSIIKINVFILKFLNTFLVI 30
H P + +II + ++ +LNTFL++
Sbjct: 540 HRDTPVVRASGRELTIILLAGVLVCYLNTFLLL 572
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 45 IQKFQNENVDFYNAGGM 95
IQ F N+N FY G M
Sbjct: 307 IQFFANKNQKFYERGIM 323
>AY078399-1|AAL83702.1| 31|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 31
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 76 FIMLVACVASAAYGALV 126
++ +VAC+ A GA+V
Sbjct: 4 WLFMVACLGIACQGAIV 20
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 76 FIMLVACVASAAYGALV 126
++ +VAC+ A GA+V
Sbjct: 4 WLFMVACLGIACQGAIV 20
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 128 HTKAPYAADATHATSIIKINVFILKFLNTFLVI 30
H P + +II + ++ +LNTFL++
Sbjct: 630 HRDTPVVRASGRELTIILLAGVLVCYLNTFLLL 662
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,521
Number of Sequences: 438
Number of extensions: 1937
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8680350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -