Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17d10
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49909-12|CAA90114.2|  121|Caenorhabditis elegans Hypothetical p...    48   4e-06
Z19152-10|CAA79545.2|  348|Caenorhabditis elegans Hypothetical p...    27   5.8  

>Z49909-12|CAA90114.2|  121|Caenorhabditis elegans Hypothetical
           protein C14A4.10 protein.
          Length = 121

 Score = 48.0 bits (109), Expect = 4e-06
 Identities = 18/40 (45%), Positives = 30/40 (75%)
 Frame = +2

Query: 251 RKRLFSKELRCMMYGFGDDQNPYTESVDFLEDLVIEFITE 370
           +K +  ++LR M+YGFGDD+ PY +++D LE +V+ +I E
Sbjct: 25  KKHVLRRDLRSMVYGFGDDKEPYDKTLDTLEAIVLNYIKE 64


>Z19152-10|CAA79545.2|  348|Caenorhabditis elegans Hypothetical
           protein B0464.8 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 9/23 (39%), Positives = 18/23 (78%)
 Frame = +2

Query: 284 MMYGFGDDQNPYTESVDFLEDLV 352
           +M+  GDD+NP +E+ DF+ +++
Sbjct: 44  LMFTSGDDENPLSENEDFVVNIL 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,655,073
Number of Sequences: 27780
Number of extensions: 155538
Number of successful extensions: 306
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)