Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17d09
(538 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p pro... 66 2e-11
AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA ... 66 2e-11
AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p pro... 66 4e-11
AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA... 66 4e-11
AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p pro... 49 5e-06
AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-P... 49 5e-06
AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p pro... 44 1e-04
AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-P... 44 1e-04
U43504-1|AAC46955.1| 618|Drosophila melanogaster DmORC2 protein. 28 7.0
AY051471-1|AAK92895.1| 618|Drosophila melanogaster GH13824p pro... 28 7.0
AF246305-1|AAF99606.1| 618|Drosophila melanogaster ORC2 protein. 28 7.0
AE014297-1778|AAF55006.1| 618|Drosophila melanogaster CG3041-PA... 28 7.0
>AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p
protein.
Length = 213
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/82 (41%), Positives = 46/82 (56%)
Frame = +2
Query: 257 SLCPGCRVFDSAILAPTIERLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKL 436
SLCP R F L P E Y++I + P+GK+++ E+NG F CQHGP EC GN+L
Sbjct: 43 SLCPDSRNFMHQ-LGPVYEEFGDYIDILLVPFGKSQS-ERNGAI-FHCQHGPAECKGNRL 99
Query: 437 HACAIDVIGNITIAVMYNSCMM 502
+C I+ N V + C M
Sbjct: 100 QSCVINSTANQAAQVKFVVCQM 121
>AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA
protein.
Length = 213
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/82 (41%), Positives = 46/82 (56%)
Frame = +2
Query: 257 SLCPGCRVFDSAILAPTIERLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKL 436
SLCP R F L P E Y++I + P+GK+++ E+NG F CQHGP EC GN+L
Sbjct: 43 SLCPDSRNFMHQ-LGPVYEEFGDYIDILLVPFGKSQS-ERNGAI-FHCQHGPAECKGNRL 99
Query: 437 HACAIDVIGNITIAVMYNSCMM 502
+C I+ N V + C M
Sbjct: 100 QSCVINSTANQAAQVKFVVCQM 121
>AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p
protein.
Length = 250
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 SLCPGCRVFDSAILAPTIE-RLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNK 433
SLCP F + + P ++ L + + P+GK++ + + + F C HGP ECYGNK
Sbjct: 33 SLCPDSAKFITEQVYPAVKGELRDVVELTFVPFGKSQFVTQGSEVTFTCHHGPNECYGNK 92
Query: 434 LHACAIDVIGNITIAVMY 487
+HACAI+ I + V Y
Sbjct: 93 VHACAIEHIQANSYQVEY 110
>AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA
protein.
Length = 250
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 SLCPGCRVFDSAILAPTIE-RLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNK 433
SLCP F + + P ++ L + + P+GK++ + + + F C HGP ECYGNK
Sbjct: 33 SLCPDSAKFITEQVYPAVKGELRDVVELTFVPFGKSQFVTQGSEVTFTCHHGPNECYGNK 92
Query: 434 LHACAIDVIGNITIAVMY 487
+HACAI+ I + V Y
Sbjct: 93 VHACAIEHIQANSYQVEY 110
>AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p
protein.
Length = 207
Score = 48.8 bits (111), Expect = 5e-06
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 SLCPGCRVFDSAILAPTIERLNQ--YLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGN 430
+LCP C F + L P++ R ++ + ++ + PYG A+T + +G E CQHG EC N
Sbjct: 38 ALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTND-DGNVE--CQHGVMECELN 94
Query: 431 KLHACAIDVIGNITIAVMYNSCMM 502
HAC ++ +I ++ +CMM
Sbjct: 95 AWHACILE-HHDIAQSLKLIACMM 117
>AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-PA
protein.
Length = 207
Score = 48.8 bits (111), Expect = 5e-06
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 SLCPGCRVFDSAILAPTIERLNQ--YLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGN 430
+LCP C F + L P++ R ++ + ++ + PYG A+T + +G E CQHG EC N
Sbjct: 38 ALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTND-DGNVE--CQHGVMECELN 94
Query: 431 KLHACAIDVIGNITIAVMYNSCMM 502
HAC ++ +I ++ +CMM
Sbjct: 95 AWHACILE-HHDIAQSLKLIACMM 117
>AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p
protein.
Length = 216
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 SLCPGCRVFDSAILAPTIERLNQY--LNINIYPYGKAKTIEKN--GKYEFICQHGPEECY 424
+LCP F L ++ + + ++ +YP+GKA G+ + CQHG +EC
Sbjct: 39 ALCPDSMSFIRRRLYDALQDNDWWSVTDLKLYPFGKAGFYNNTSTGESQVFCQHGVDECE 98
Query: 425 GNKLHACAIDVIGNITIAVMYNSCMM 502
N LHAC I+ + +I A CM+
Sbjct: 99 LNALHACIIETL-DIRKAFNLIYCML 123
>AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-PA
protein.
Length = 216
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 SLCPGCRVFDSAILAPTIERLNQY--LNINIYPYGKAKTIEKN--GKYEFICQHGPEECY 424
+LCP F L ++ + + ++ +YP+GKA G+ + CQHG +EC
Sbjct: 39 ALCPDSMSFIRRRLYDALQDNDWWSVTDLKLYPFGKAGFYNNTSTGESQVFCQHGVDECE 98
Query: 425 GNKLHACAIDVIGNITIAVMYNSCMM 502
N LHAC I+ + +I A CM+
Sbjct: 99 LNALHACIIETL-DIRKAFNLIYCML 123
>U43504-1|AAC46955.1| 618|Drosophila melanogaster DmORC2 protein.
Length = 618
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 113 RGQEEYIVSNFIEIDQTRSSPLE 181
+GQEE IV N++E+ RSS E
Sbjct: 73 KGQEERIVVNYVEMSDERSSDAE 95
>AY051471-1|AAK92895.1| 618|Drosophila melanogaster GH13824p
protein.
Length = 618
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 113 RGQEEYIVSNFIEIDQTRSSPLE 181
+GQEE IV N++E+ RSS E
Sbjct: 73 KGQEERIVVNYVEMSDERSSDAE 95
>AF246305-1|AAF99606.1| 618|Drosophila melanogaster ORC2 protein.
Length = 618
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 113 RGQEEYIVSNFIEIDQTRSSPLE 181
+GQEE IV N++E+ RSS E
Sbjct: 73 KGQEERIVVNYVEMSDERSSDAE 95
>AE014297-1778|AAF55006.1| 618|Drosophila melanogaster CG3041-PA
protein.
Length = 618
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 113 RGQEEYIVSNFIEIDQTRSSPLE 181
+GQEE IV N++E+ RSS E
Sbjct: 73 KGQEERIVVNYVEMSDERSSDAE 95
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,842,875
Number of Sequences: 53049
Number of extensions: 397586
Number of successful extensions: 907
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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