Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17d09
         (538 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-4|CAB04345.1|  277|Caenorhabditis elegans Hypothetical pr...    55   4e-08
L16622-5|ABC71836.1|  263|Caenorhabditis elegans Hypothetical pr...    55   4e-08
L16622-4|AAA27914.1|  323|Caenorhabditis elegans Hypothetical pr...    55   4e-08
AF077534-7|AAK71376.1|  319|Caenorhabditis elegans Prion-like-(q...    48   3e-06
Z37093-1|CAA85467.1|  264|Caenorhabditis elegans Hypothetical pr...    45   4e-05
Z32683-12|CAA83624.2|  186|Caenorhabditis elegans Hypothetical p...    41   5e-04
Z37093-2|CAA85464.1|  218|Caenorhabditis elegans Hypothetical pr...    36   0.014
Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    29   2.1  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    29   2.1  
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL034393-2|CAA22309.1|  220|Caenorhabditis elegans Hypothetical ...    28   3.7  
Z83105-10|CAB05484.1|  499|Caenorhabditis elegans Hypothetical p...    27   6.5  

>Z81534-4|CAB04345.1|  277|Caenorhabditis elegans Hypothetical
           protein F37H8.5 protein.
          Length = 277

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +2

Query: 257 SLCPGCRVFDSAILAPTI-ERLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNK 433
           +LCP C+ F +  L P + +    Y+NI + P+G AK +E +G  +  CQHG EEC  NK
Sbjct: 84  ALCPDCQNFLTKQLYPIVFKNFANYVNIELVPFGNAKVLE-DGTIK--CQHGEEECSINK 140

Query: 434 LHACAID 454
              C ID
Sbjct: 141 FEGCFID 147


>L16622-5|ABC71836.1|  263|Caenorhabditis elegans Hypothetical
           protein C02D5.2b protein.
          Length = 263

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = +2

Query: 314 RLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIG 463
           RLN+ + +N+ P+GKA+  EK   +E  CQHGP EC  N+L  C ID  G
Sbjct: 109 RLNR-IELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFG 157


>L16622-4|AAA27914.1|  323|Caenorhabditis elegans Hypothetical
           protein C02D5.2a protein.
          Length = 323

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = +2

Query: 314 RLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIG 463
           RLN+ + +N+ P+GKA+  EK   +E  CQHGP EC  N+L  C ID  G
Sbjct: 169 RLNR-IELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFG 217


>AF077534-7|AAK71376.1|  319|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 48
           protein.
          Length = 319

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 22/68 (32%), Positives = 38/68 (55%)
 Frame = +2

Query: 257 SLCPGCRVFDSAILAPTIERLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKL 436
           +LCP C+ F +  L     +    L + + P+G ++ I ++G   F C HG +EC  N+L
Sbjct: 149 ALCPYCQKFIANQLGSVFNQFQGQLILELVPWGNSR-IMRDGS--FSCNHGQKECDANRL 205

Query: 437 HACAIDVI 460
            +C ID++
Sbjct: 206 QSCVIDIL 213


>Z37093-1|CAA85467.1|  264|Caenorhabditis elegans Hypothetical
           protein ZK669.2 protein.
          Length = 264

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
 Frame = +2

Query: 176 LESDTYLMADKIXXXXXXXXXXXXXXXSLCPGC-RVFDSAILAP-TIERLNQYLNINIYP 349
           LE    +MAD+                SLCP   R F + I+   T  + +  +NI  +P
Sbjct: 55  LEIYKAMMADQASRAKTPPINIEFFGESLCPDTTRYFRNHIMPVWTSLQASSTINITYHP 114

Query: 350 YGKAKTIEK-NGKYEFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHG 526
           +G A             CQHGP EC  N L AC I  +    + +   +CM   N+ +  
Sbjct: 115 FGLASCRRSAETGIRCNCQHGPAECQLNMLQACVISTLQVPQLYLPIVNCMQGKNKFSSA 174

Query: 527 SDD 535
            DD
Sbjct: 175 VDD 177


>Z32683-12|CAA83624.2|  186|Caenorhabditis elegans Hypothetical
           protein R07E5.4 protein.
          Length = 186

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
 Frame = +2

Query: 257 SLCPGCRVFDSAILAPTIERLNQYLNINIYPYGKAK-TIEKNGKYEFICQHGPEECYGNK 433
           S CP C       + P        +N+ I P+GK   T + N  +   C HG  EC  N+
Sbjct: 27  SQCPYCTKLLREQIWPFYVNRPGIMNLQIVPFGKGDCTYDYNRNFHCTCMHGATECDLNR 86

Query: 434 LHACAIDVIGNITIAVMYNSCMMDLNQKNHG 526
           L  CAI       + ++  +C+  L     G
Sbjct: 87  LQNCAISYFPRRHLGLV--TCLQGLTTLREG 115


>Z37093-2|CAA85464.1|  218|Caenorhabditis elegans Hypothetical
           protein ZK669.3 protein.
          Length = 218

 Score = 36.3 bits (80), Expect = 0.014
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +2

Query: 329 LNINIYPYG-KAKTIEKNGKYEFICQ--HGPEECYGNKLHACAIDVIGN 466
           +N + +PYG K   ++     + +C   HG  EC  N+L AC I+ + N
Sbjct: 65  INFDYHPYGIKTTCVDSESADDVVCDCHHGNRECLLNQLQACVIEALPN 113


>Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical
           protein F37D6.2c protein.
          Length = 584

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +2

Query: 389 EFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDL 538
           +F+C + P +CY  KL    ++VI +I   V+++  +  + +K    D +
Sbjct: 170 KFMCSYNPTKCY--KLCGSVVEVINHIWAHVIHDPPLPPIEKKESKDDGM 217


>Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical
           protein F37D6.2b protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +2

Query: 389 EFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDL 538
           +F+C + P +CY  KL    ++VI +I   V+++  +  + +K    D +
Sbjct: 169 KFMCSYNPTKCY--KLCGSVVEVINHIWAHVIHDPPLPPIEKKESKDDGM 216


>Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical
           protein F37D6.2a protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +2

Query: 389 EFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDL 538
           +F+C + P +CY  KL    ++VI +I   V+++  +  + +K    D +
Sbjct: 170 KFMCSYNPTKCY--KLCGSVVEVINHIWAHVIHDPPLPPIEKKESKDDGM 217


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 317 IFQLLVLISRSRTLYSQDTRIRNRPLHLLFHQHTVVFYQPLNMCLIPTG 171
           IF+ +  +  S  + ++D  I  + LH L +  +VV Y+P+   L+  G
Sbjct: 91  IFEFIHRVMGSNIVLNKDPLINAQTLHDLLYMTSVVVYEPVFKWLVDAG 139


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 317 IFQLLVLISRSRTLYSQDTRIRNRPLHLLFHQHTVVFYQPLNMCLIPTG 171
           IF+ +  +  S  + ++D  I  + LH L +  +VV Y+P+   L+  G
Sbjct: 91  IFEFIHRVMGSNIVLNKDPLINAQTLHDLLYMTSVVVYEPVFKWLVDAG 139


>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
           protein C44B9.4 protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 412 RRVLREQITRV-CHRRHWKHNYRSNVQLLHDGLEPEEP 522
           R  L+  I R  CH+ H +HNY S  Q  HD  E  +P
Sbjct: 756 RSALQNFIRREDCHQMHLEHNYSSLYQ-THDSDEENQP 792


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
           protein F37A4.4 protein.
          Length = 1163

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 320 NQYLNINIYPYGKAKTIEKNGKY 388
           NQY+N+ +Y +GK    EK  +Y
Sbjct: 793 NQYINLYLYYFGKTSDYEKRWRY 815


>AL034393-2|CAA22309.1|  220|Caenorhabditis elegans Hypothetical
           protein Y18D10A.2 protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 377 NGKYEFICQHGPEECYGNKLHACA 448
           +GKY   C HG  EC  NKL  C+
Sbjct: 88  DGKYVNRCLHGALECALNKLQMCS 111


>Z83105-10|CAB05484.1|  499|Caenorhabditis elegans Hypothetical
           protein F14H3.10 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 332 NINIYPYGKAKTIEKNGKYEFI 397
           N ++YPY  AK  + +GK EF+
Sbjct: 476 NEDVYPYSSAKLPDVSGKLEFV 497


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,964,919
Number of Sequences: 27780
Number of extensions: 213056
Number of successful extensions: 605
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)