Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17d07
(506 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029652-1|AAH29652.1| 409|Homo sapiens allantoicase protein. 122 7e-28
AC010907-2|AAY24236.1| 391|Homo sapiens unknown protein. 118 2e-26
AF395820-1|AAK72970.1| 337|Homo sapiens allantoicase protein. 98 2e-20
BC130567-1|AAI30568.1| 509|Homo sapiens solute carrier family 1... 29 7.1
BC126238-1|AAI26239.1| 509|Homo sapiens solute carrier family 1... 29 7.1
AK125791-1|BAC86293.1| 509|Homo sapiens member 4 (SLC16A4). p... 29 7.1
BC016445-1|AAH16445.1| 617|Homo sapiens vacuolar protein sortin... 29 9.3
AK027754-1|BAB55345.1| 617|Homo sapiens protein ( Homo sapiens ... 29 9.3
AF308803-1|AAG34680.1| 617|Homo sapiens vacuolar protein sortin... 29 9.3
AF201694-1|AAF91174.1| 617|Homo sapiens vacuolar protein sortin... 29 9.3
>BC029652-1|AAH29652.1| 409|Homo sapiens allantoicase protein.
Length = 409
Score = 122 bits (294), Expect = 7e-28
Identities = 49/78 (62%), Positives = 62/78 (79%)
Frame = +3
Query: 75 YTSLSELASHSAGGKVLFATDDFFATCENMIADEEPIFIADKYTEYGKWMDGWETRRKRI 254
+T L ++AS S GGK+LFATDDFFA EN+I + P F +YTE+GKWMDGWETRRKRI
Sbjct: 16 FTQLMDMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKRI 75
Query: 255 PGHDWCIIKLATKCVIKG 308
PGHDWC+++L + VI+G
Sbjct: 76 PGHDWCVLRLGIQGVIRG 93
Score = 35.5 bits (78), Expect = 0.11
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 284 GYQMRHKRIAVGAPWFLRNVDLHDDLELDSLRLVIDTAFFTGNNAPKFSIQAATLTSEDE 463
G++ R KRI G W + + + + +D ++FTG+ AP+ SIQAA L +
Sbjct: 67 GWETRRKRIP-GHDWCVLRLGIQGVIR----GFDVDVSYFTGDYAPRVSIQAANLEEDKL 121
Query: 464 KLIPVR 481
IP R
Sbjct: 122 PEIPER 127
>AC010907-2|AAY24236.1| 391|Homo sapiens unknown protein.
Length = 391
Score = 118 bits (283), Expect = 2e-26
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +3
Query: 90 ELASHSAGGKVLFATDDFFATCENMIADEEPIFIADKYTEYGKWMDGWETRRKRIPGHDW 269
++AS S GGK+LFATDDFFA EN+I + P F +YTE+GKWMDGWETRRKRIPGHDW
Sbjct: 2 DMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKRIPGHDW 61
Query: 270 CIIKLATKCVIKG 308
C+++L + VI+G
Sbjct: 62 CVLRLGIQGVIRG 74
Score = 35.9 bits (79), Expect = 0.081
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +2
Query: 284 GYQMRHKRIAVGAPWFLRNVDLHDDLELDSLRLVIDTAFFTGNNAPKFSIQAATLTSEDE 463
G++ R KRI G W + + + + +D ++FTG+ AP+ SIQAA L +
Sbjct: 48 GWETRRKRIP-GHDWCVLRLGIQGVIR----GFDVDVSYFTGDYAPRVSIQAANLEEDKL 102
Query: 464 KLIPVRHPTMG 496
IP R G
Sbjct: 103 PEIPERGTRTG 113
>AF395820-1|AAK72970.1| 337|Homo sapiens allantoicase protein.
Length = 337
Score = 97.9 bits (233), Expect = 2e-20
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +3
Query: 132 TDDFFATCENMIADEEPIFIADKYTEYGKWMDGWETRRKRIPGHDWCIIKLATKCVIKG 308
TDDFFA EN+I + P F +YTE+GKWMDGWETRRKRIPGHDWC+++L + VI+G
Sbjct: 1 TDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRG 59
Score = 35.5 bits (78), Expect = 0.11
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 284 GYQMRHKRIAVGAPWFLRNVDLHDDLELDSLRLVIDTAFFTGNNAPKFSIQAATLTSEDE 463
G++ R KRI G W + + + + +D ++FTG+ AP+ SIQAA L +
Sbjct: 33 GWETRRKRIP-GHDWCVLRLGIQGVIR----GFDVDVSYFTGDYAPRVSIQAANLEEDKL 87
Query: 464 KLIPVR 481
IP R
Sbjct: 88 PEIPER 93
>BC130567-1|AAI30568.1| 509|Homo sapiens solute carrier family 16,
member 9 (monocarboxylic acid transporter 9) protein.
Length = 509
Score = 29.5 bits (63), Expect = 7.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 212 VLRIFISYEYWLFISYHIFTGCKEVICGE*YFSTSTVTCQ 93
+L F Y+LF SY I G CG Y +T T+TCQ
Sbjct: 94 MLSSFAPNIYFLFFSYGIVVGLG---CGLLYTATVTITCQ 130
>BC126238-1|AAI26239.1| 509|Homo sapiens solute carrier family 16,
member 9 (monocarboxylic acid transporter 9) protein.
Length = 509
Score = 29.5 bits (63), Expect = 7.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 212 VLRIFISYEYWLFISYHIFTGCKEVICGE*YFSTSTVTCQ 93
+L F Y+LF SY I G CG Y +T T+TCQ
Sbjct: 94 MLSSFAPNIYFLFFSYGIVVGLG---CGLLYTATVTITCQ 130
>AK125791-1|BAC86293.1| 509|Homo sapiens member 4 (SLC16A4).
protein.
Length = 509
Score = 29.5 bits (63), Expect = 7.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 212 VLRIFISYEYWLFISYHIFTGCKEVICGE*YFSTSTVTCQ 93
+L F Y+LF SY I G CG Y +T T+TCQ
Sbjct: 94 MLSSFAPNIYFLFFSYGIVVGLG---CGLLYTATVTITCQ 130
>BC016445-1|AAH16445.1| 617|Homo sapiens vacuolar protein sorting
33 homolog B (yeast) protein.
Length = 617
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 27 CSQLCPLLKMLIHPPSYTSLSELASHSAGGKVLFATDDFFATCENMIADEEPIF 188
C + P +K + + S + +LA + KV+F+ F+A CE M+ +EE I+
Sbjct: 82 CFLVRPRIKNMRYIASLVNADKLAGRTRKYKVIFSPQKFYA-CE-MVLEEEGIY 133
>AK027754-1|BAB55345.1| 617|Homo sapiens protein ( Homo sapiens
cDNA FLJ14848 fis, clone PLACE1000492, highly similar to
Rat vacuolar protein sorting homolog r-vps33b mRNA. ).
Length = 617
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 27 CSQLCPLLKMLIHPPSYTSLSELASHSAGGKVLFATDDFFATCENMIADEEPIF 188
C + P +K + + S + +LA + KV+F+ F+A CE M+ +EE I+
Sbjct: 82 CFLVRPRIKNMRYIASLVNADKLAGRTRKYKVIFSPQKFYA-CE-MVLEEEGIY 133
>AF308803-1|AAG34680.1| 617|Homo sapiens vacuolar protein sorting
protein 33B protein.
Length = 617
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 27 CSQLCPLLKMLIHPPSYTSLSELASHSAGGKVLFATDDFFATCENMIADEEPIF 188
C + P +K + + S + +LA + KV+F+ F+A CE M+ +EE I+
Sbjct: 82 CFLVRPRIKNMRYIASLVNADKLAGRTRKYKVIFSPQKFYA-CE-MVLEEEGIY 133
>AF201694-1|AAF91174.1| 617|Homo sapiens vacuolar protein sorting
33B protein.
Length = 617
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 27 CSQLCPLLKMLIHPPSYTSLSELASHSAGGKVLFATDDFFATCENMIADEEPIF 188
C + P +K + + S + +LA + KV+F+ F+A CE M+ +EE I+
Sbjct: 82 CFLVRPRIKNMRYIASLVNADKLAGRTRKYKVIFSPQKFYA-CE-MVLEEEGIY 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,634,858
Number of Sequences: 237096
Number of extensions: 1721859
Number of successful extensions: 3779
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3779
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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