Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17d05
         (531 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122191-1|AAM52703.1|  479|Drosophila melanogaster LD44262p pro...    64   1e-10
AE013599-2548|AAF57802.1|  479|Drosophila melanogaster CG6401-PA...    64   1e-10

>AY122191-1|AAM52703.1|  479|Drosophila melanogaster LD44262p
           protein.
          Length = 479

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 28/84 (33%), Positives = 51/84 (60%)
 Frame = +1

Query: 49  IMCPFKCNRLVREMYSWMDITKRTEIVYDRILLNKNKPLGQQLRSYLNSGVWPFLLVISL 228
           +MCP++CN LV  +Y+W D+  RT  VYDR+L  ++    + + +    G W FL+   +
Sbjct: 393 VMCPYRCNELVETLYNWEDVALRTVKVYDRVLNERSFTTSELVFAVWQHGSW-FLVFFVV 451

Query: 229 MYILLQLTERIYKRKYIDKARDLR 300
            + L++L E    RK+++ A+D++
Sbjct: 452 AHFLMRLLELWRPRKHVEIAQDVQ 475


>AE013599-2548|AAF57802.1|  479|Drosophila melanogaster CG6401-PA
           protein.
          Length = 479

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 28/84 (33%), Positives = 51/84 (60%)
 Frame = +1

Query: 49  IMCPFKCNRLVREMYSWMDITKRTEIVYDRILLNKNKPLGQQLRSYLNSGVWPFLLVISL 228
           +MCP++CN LV  +Y+W D+  RT  VYDR+L  ++    + + +    G W FL+   +
Sbjct: 393 VMCPYRCNELVETLYNWEDVALRTVKVYDRVLNERSFTTSELVFAVWQHGSW-FLVFFVV 451

Query: 229 MYILLQLTERIYKRKYIDKARDLR 300
            + L++L E    RK+++ A+D++
Sbjct: 452 AHFLMRLLELWRPRKHVEIAQDVQ 475


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,789,709
Number of Sequences: 53049
Number of extensions: 378086
Number of successful extensions: 850
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)