Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17c24
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 43 2e-04
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 40 8e-04
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 40 0.001
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 38 0.005
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 36 0.014
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 35 0.032
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 34 0.056
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 33 0.17
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 33 0.17
Z48638-6|CAA88567.1| 541|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical pr... 31 0.52
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 29 2.1
U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical pr... 28 3.7
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 6.4
Z77662-9|CAB01198.1| 456|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical p... 27 8.5
Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical pr... 27 8.5
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +2
Query: 284 SVSSLAAMFGVSAFAALADGLGRKIGVVAVAAVQALCWIIKLCPSTTVTLIIARICSGLG 463
SV + G F ++D GRKIG + + W+I + + I+R G
Sbjct: 133 SVQMFGVLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLIVVQSRNLLHFTISRTIVGFF 192
Query: 464 AGGAFAIVPMYIKRN*PEQY 523
GG+ +I+ ++I N P+++
Sbjct: 193 TGGSISIINVFIMENIPKKH 212
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 40.3 bits (90), Expect = 8e-04
Identities = 32/112 (28%), Positives = 49/112 (43%)
Frame = +2
Query: 179 YGLQNGWISPFAKKLQSEDSPTGRPLTSTEFYWVASVSSLAAMFGVSAFAALADGLGRKI 358
+G G +S A L ++ +PL S + S++ A G +D LGRK
Sbjct: 42 FGYDTGIVS--AAMLYVPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDFLGRKK 99
Query: 359 GVVAVAAVQALCWIIKLCPSTTVTLIIARICSGLGAGGAFAIVPMYIKRN*P 514
++ + + II T + L+I RI GL G A IVP+Y+ P
Sbjct: 100 IIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASP 151
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 39.5 bits (88), Expect = 0.001
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 22/176 (12%)
Frame = +2
Query: 38 VLCK*RENNTSLKNTEDMSQTS-EESTKKGHTYL----QWT---FSIISNIAYLNY--GL 187
V+ +N+ S N E S ++ E+S K+ H WT F IS+IA ++ G
Sbjct: 4 VVASQNKNDRSFSNMESESSSNVEKSEKENHHQSLPDENWTPFLFFCISSIALASFQDGF 63
Query: 188 QNGWISP-------FAKKLQSEDSPTGRPLTSTEFYWVASVS--SLAAMFGVSAFAALAD 340
Q G I+ + KK E +F W +VS S+ MFG LAD
Sbjct: 64 QIGCINAPGPLIIDWIKKCHFELFGEVLSQYQADFIWSVAVSMFSVGGMFGSFCSGFLAD 123
Query: 341 GLGRKIGVV---AVAAVQALCWIIKLCPSTTVTLIIARICSGLGAGGAFAIVPMYI 499
GRK ++ +A + A+C + ++ R GL G +VPM++
Sbjct: 124 KFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVFGRFLVGLNCGITSGLVPMFL 179
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/101 (22%), Positives = 46/101 (45%)
Frame = +2
Query: 212 AKKLQSEDSPTGRPLTSTEFYWVASVSSLAAMFGVSAFAALADGLGRKIGVVAVAAVQAL 391
A L D+P +P+ + + S+S A G +D +GR+ ++ +A+ +
Sbjct: 48 AAMLYMPDAPGLKPMDTVWQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTI 107
Query: 392 CWIIKLCPSTTVTLIIARICSGLGAGGAFAIVPMYIKRN*P 514
++ + L++ R+ G+ G A IVP+Y+ P
Sbjct: 108 GALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYLGETAP 148
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 36.3 bits (80), Expect = 0.014
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Frame = +2
Query: 74 KNTEDMSQTSEESTKKGH-TYLQWTFSIISNIAYLNYGLQNGWISPFAKKLQSEDSPTGR 250
K +E E++ K G YL + +II + G +S A L ++P +
Sbjct: 7 KVSESGRPRPEKNPKLGFFVYLLGSAAIIGGFLF---GYDTSVVS--AAMLYVPEAPGLK 61
Query: 251 PLTSTEFYWVASVSSLAAMFGVSAFAALADGLGRKIGVVAVAAVQALCWIIKLCPSTTVT 430
P+ + + S++ A G A +D GRK ++ + +I T +
Sbjct: 62 PMGTVWKEVIVSITPGMAAVGAWFSGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTKIV 121
Query: 431 LIIARICSGLGAGGAFAIVPMYI 499
++I RI G+G G A +VP+Y+
Sbjct: 122 MLIGRIFLGVGIGFASMVVPVYL 144
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 35.1 bits (77), Expect = 0.032
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 287 VSSLAAMFGVSAFAALADGLGRK-IGVVAVAAVQALCWIIKLCPSTTVTLIIARICSGLG 463
V L + G F L+D GRK IG++ + L P+ + L IAR CSGL
Sbjct: 91 VQYLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSPNRQL-LFIARFCSGLS 149
Query: 464 AGGAFAIVPMYI 499
G + +I
Sbjct: 150 IAGVLVCICAWI 161
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 34.3 bits (75), Expect = 0.056
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +2
Query: 254 LTSTEFYWVASVSSLA--AMFGVSAFAALADGLGRKIGVVAVAAVQALCWIIKLCP---S 418
LT + W VSS+A A+ G S + + GR+ G+ + + +L S
Sbjct: 52 LTVSNVIWSFVVSSIAIGAILGASFTRIIGEKYGRRNGMFFNGILNVFAALFELVAKRFS 111
Query: 419 TTVTLIIARICSGLGAGGAFAIVPMYIKRN*PEQY 523
+ LI R G+ G + +VPMY+ P +Y
Sbjct: 112 SPELLIFGRFVYGINMGLSSGLVPMYLMEITPYKY 146
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/80 (20%), Positives = 36/80 (45%)
Frame = +2
Query: 284 SVSSLAAMFGVSAFAALADGLGRKIGVVAVAAVQALCWIIKLCPSTTVTLIIARICSGLG 463
++ + + G + F ++D GR+ ++ A+ +I + ++ R SG+
Sbjct: 130 TIQTFGVLVGAAIFGQVSDNFGRRKALIISCIGNAIFNLISSYSPSLFYFMLWRTVSGIF 189
Query: 464 AGGAFAIVPMYIKRN*PEQY 523
AGG + +Y+ N P +
Sbjct: 190 AGGLTVVQMVYMVENIPRHH 209
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/80 (20%), Positives = 36/80 (45%)
Frame = +2
Query: 284 SVSSLAAMFGVSAFAALADGLGRKIGVVAVAAVQALCWIIKLCPSTTVTLIIARICSGLG 463
++ + + G + F ++D GR+ ++ A+ +I + ++ R SG+
Sbjct: 130 TIQTFGVLVGAAIFGQVSDNFGRRKALIISCIGNAIFNLISSYSPSLFYFMLWRTVSGIF 189
Query: 464 AGGAFAIVPMYIKRN*PEQY 523
AGG + +Y+ N P +
Sbjct: 190 AGGLTVVQMVYMVENIPRHH 209
>Z48638-6|CAA88567.1| 541|Caenorhabditis elegans Hypothetical
protein ZK892.3 protein.
Length = 541
Score = 31.9 bits (69), Expect = 0.30
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +2
Query: 257 TSTEFYWVASVSSLAAMFGVSAFAALADGLGRKIGVVAVAAVQALCWIIKLCPSTTVTLI 436
TS Y ++ L +F LAD LGR+ A A+ + I+ + +
Sbjct: 101 TSLTHYSASTNMYLGVLFANLILGVLADKLGRRPIFFASIAIGVVSLILSAAIPSLIAFY 160
Query: 437 IARICSGLGAGGA 475
I R +G+G GA
Sbjct: 161 IFRFTTGVGVAGA 173
>Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical
protein Y37A1A.3 protein.
Length = 500
Score = 31.1 bits (67), Expect = 0.52
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Frame = +2
Query: 209 FAKKLQSEDSPTGRPLTSTEFYW--VASVSSLAAMFGVSAFAALADGLGRKIGVVAVAAV 382
F + ++P L+ E W + ++ L + G +A+ GRK GV+
Sbjct: 56 FLNASKHSNNPDDNELSHLENEWSFIVAIFFLGSATGAFLIKTVAERFGRKKGVIVSLFA 115
Query: 383 Q---ALCWIIKLCPSTTVTLIIARICSGLGAGGAFAIVPMYIKRN*P 514
Q ++ I+ + I AR G+G + I M++ + P
Sbjct: 116 QVTSSMLTIVSFWIVNHILFIFARFLMGVGITISMGIAAMFVTESSP 162
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 161 NIAYLNYGLQNGWISPFAKKLQSEDSPTGRPL 256
N +Y+ Q W+ PFA+K + E GR L
Sbjct: 413 NFSYIYVDKQKDWVKPFAEKRKGELKNEGRDL 444
>U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical
protein F44A2.5b protein.
Length = 390
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 TSRRA*SSNERHVLCK*RENNTSLKNTE-DMSQTSEESTKKGH 127
TS RA S HV R +N SLK TE +S S S++K +
Sbjct: 92 TSSRASSRASNHVSSDDRHSNGSLKRTESSLSSESTPSSQKSY 134
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 275 WVASVSSLAAMFGVSAFAALADGLGRK-IGVVAVAAVQALCWIIKLCPSTTVTLIIARIC 451
W+A++ + A+ G + L D GRK + V ++ PS V ++ IC
Sbjct: 98 WIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASGFAPSWEVFAVLLFIC 157
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 154 YRESPLQVRVSFFRRFFTC 98
Y++S + R+ FFRRFF C
Sbjct: 115 YKKSSNRQRLGFFRRFFAC 133
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 154 YRESPLQVRVSFFRRFFTC 98
Y++S + R+ FFRRFF C
Sbjct: 115 YKKSSNRQRLGFFRRFFAC 133
>Z77662-9|CAB01198.1| 456|Caenorhabditis elegans Hypothetical
protein F47B8.10 protein.
Length = 456
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 53 RENNTSLKNTEDMSQTSEESTKKG 124
RE+N S K TED + + E KKG
Sbjct: 178 REDNVSPKQTEDDEEPNPEKKKKG 201
>Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 27.1 bits (57), Expect = 8.5
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Frame = +2
Query: 107 ESTKKGHTYLQWTFSIISNIAYLNYGLQNGWISPFAKKLQSEDSPTGRPLTSTEFYWVAS 286
E T YL FS+I N Y Y + + KKL + T ++F W+ +
Sbjct: 4 EHTNWRVVYLMGVFSLIQNTQYSIYLTS---MFSYLKKLDAT-------ATESQFGWIMA 53
Query: 287 VSSLAAMFGVSAFAALADGLGRK------IGVVAVAAVQALCWIIKLCPSTTV--TLIIA 442
SSL G + GRK G + + A + ++ PS V ++++
Sbjct: 54 TSSLGHCIGCFVL-GWWNSRGRKSSPPMHCGFLLMLASNLVYLLVDSVPSDWVAHVMMVS 112
Query: 443 RICSGLGAGGA 475
R+ G G G +
Sbjct: 113 RLLGGFGMGNS 123
>Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 27.1 bits (57), Expect = 8.5
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Frame = +2
Query: 107 ESTKKGHTYLQWTFSIISNIAYLNYGLQNGWISPFAKKLQSEDSPTGRPLTSTEFYWVAS 286
E T YL FS+I N Y Y + + KKL + T ++F W+ +
Sbjct: 4 EHTNWRVVYLMGVFSLIQNTQYSIYLTS---MFSYLKKLDAT-------ATESQFGWIMA 53
Query: 287 VSSLAAMFGVSAFAALADGLGRK------IGVVAVAAVQALCWIIKLCPSTTV--TLIIA 442
SSL G + GRK G + + A + ++ PS V ++++
Sbjct: 54 TSSLGHCIGCFVL-GWWNSRGRKSSPPMHCGFLLMLASNLVYLLVDSVPSDWVAHVMMVS 112
Query: 443 RICSGLGAGGA 475
R+ G G G +
Sbjct: 113 RLLGGFGMGNS 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,021,922
Number of Sequences: 27780
Number of extensions: 245901
Number of successful extensions: 590
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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