Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17c20
(455 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 180 6e-46
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 170 5e-43
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 161 2e-40
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 124 2e-39
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 42 2e-04
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 32 0.19
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 0.58
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 31 0.58
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 30 0.77
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 30 1.0
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 30 1.0
11_06_0437 - 23533218-23536382 29 2.3
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068 29 2.3
08_02_0610 + 19307537-19308011,19308187-19310846 28 3.1
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 4.1
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 28 4.1
04_01_0031 + 381389-381841 28 4.1
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 27 5.4
02_05_0664 + 30717551-30719491 27 5.4
02_01_0363 - 2612873-2613814 27 5.4
02_01_0358 - 2575858-2576796 27 5.4
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 27 7.2
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 27 7.2
12_01_0034 - 288931-289201,289284-289398,289524-289639,289805-28... 27 9.5
03_05_0305 + 22955142-22955342,22955485-22955583 27 9.5
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 9.5
01_05_0423 + 22032940-22033695 27 9.5
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 180 bits (437), Expect = 6e-46
Identities = 78/132 (59%), Positives = 104/132 (78%), Gaps = 2/132 (1%)
Frame = +1
Query: 64 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVH 240
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 241 LVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP- 417
VGIDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL++P
Sbjct: 61 FVGIDIFNGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLRLPT 120
Query: 418 DGDLGTQLRTDF 453
D L Q++ F
Sbjct: 121 DDTLTNQIKNGF 132
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 170 bits (413), Expect = 5e-43
Identities = 77/136 (56%), Positives = 104/136 (76%), Gaps = 6/136 (4%)
Frame = +1
Query: 64 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGH 228
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK +VE+STSKTGKHGH
Sbjct: 14 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGH 73
Query: 229 AKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDL 408
AK H V IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL
Sbjct: 74 AKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDL 133
Query: 409 KIP-DGDLGTQLRTDF 453
++P D L Q++T F
Sbjct: 134 RLPTDDSLLGQIKTGF 149
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 161 bits (391), Expect = 2e-40
Identities = 78/145 (53%), Positives = 102/145 (70%), Gaps = 15/145 (10%)
Frame = +1
Query: 64 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK-------------IVEMS 201
M D E+ HFE+ D+GAS T+P Q +RKNG +++K RPCK +VE+S
Sbjct: 1323 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVS 1382
Query: 202 TSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMA 381
TSKTGKHGHAK H V IDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+
Sbjct: 1383 TSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT 1442
Query: 382 DNGDLREDLKIP-DGDLGTQLRTDF 453
++G ++DL++P D L TQ++ F
Sbjct: 1443 ESGGTKDDLRLPSDEALLTQIKDGF 1467
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 124 bits (299), Expect(2) = 2e-39
Identities = 54/91 (59%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Frame = +1
Query: 184 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 363
K+VE+STSKTGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDG 133
Query: 364 YLTLMADNGDLREDLKIP-DGDLGTQLRTDF 453
+++L+ +NG+ ++DL++P D +L +Q++ F
Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGF 164
Score = 55.2 bits (127), Expect(2) = 2e-39
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 64 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK 186
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/48 (41%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Frame = +1
Query: 316 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDF 453
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGF 93
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.3 bits (70), Expect = 0.19
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 104 PGPQPPSPCNVRPCVKMVSLC*RVVHARLLKCPHPKPE 217
P PQPP PC PC K C + C PKP+
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 0.58
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 307 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 426
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 30.7 bits (66), Expect = 0.58
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 77 KTHTLRPETPGPQPPSPCNVRPCVKMVSLC*RVVHARLLKCPHPKPESTATLKFTWLGLI 256
K + P TP P PP P P ++ + P K T T+ +W L
Sbjct: 277 KLYKTSPPTPTPTPPPPAMTSPPKLNLAAKPNGTSGTVTSTPTVKRRVTETV--SWDSLP 334
Query: 257 SSMVKSMKI 283
+S++KS+K+
Sbjct: 335 TSLIKSVKV 343
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 25 HIIPDRC*IQNTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMS 201
H+ +Q ++ D E H T +ATFPM L N + +GR CK V +S
Sbjct: 423 HVADPTSLVQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 2 SVEEPVGHISFLTVVKFKTQQWVTSKTHTLRPETPGPQP-PSPCNVRPCVK 151
+V P+G S T+ + W + H+L P P P P+P RP ++
Sbjct: 14 AVYVPLGTASSTTIASYLLGLWSRAHRHSLPAPAPAPAPAPAPETHRPGIR 64
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 29.9 bits (64), Expect = 1.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 65 WVTSKTHTLRPETPGPQPPSPCNV 136
W+T T P+ P P PP PC+V
Sbjct: 52 WLTWPPPTPLPDAPPPPPPHPCDV 75
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 226 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 363
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
Length = 145
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 95 PETPGPQPPSPCNVRP-CVKMVSLC*RVVHARLLKCPHP 208
PE P PP C + P C + C ++ +LL+ HP
Sbjct: 8 PENESPPPPPHCWIYPECTLVTRSCCLLLRLKLLRHGHP 46
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 87 VCVFDVTHCCVLNLTTVRNDM 25
VC FD+ CC L T+ NDM
Sbjct: 836 VCHFDLRTCCALPPATLENDM 856
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 166 LKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDI 285
LK + V+ TSK G+ GH KV V ++ KK D+
Sbjct: 679 LKNQDLLDVDSGTSKIGQSGHDKVEHVTNELSISKKAADV 718
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 97 GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 255
G SG+ + + SA+ ++ F + + K+VEM ++ K + KVH G D
Sbjct: 543 GTSGSKCS--LWLSAIVRHMFTLYDFKLAKLVEMESALEDKSKNVKVHAEGYD 593
>04_01_0031 + 381389-381841
Length = 150
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Frame = +2
Query: 53 KTQQWVTSKTHTLR-----PETPGPQPPSPCNVRP 142
+ ++W T +T TLR P+T P PP P P
Sbjct: 69 RERRWCTPRTSTLRREWALPDTASPPPPLPLEPAP 103
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 71 TSKTHTLRPETPGPQPPSP 127
TS HTL P P +PPSP
Sbjct: 1108 TSDRHTLGPPLPDDRPPSP 1126
>02_05_0664 + 30717551-30719491
Length = 646
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 220 HGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 321
HG+ L+ D+ G D+ HNM++ H+
Sbjct: 385 HGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHI 418
>02_01_0363 - 2612873-2613814
Length = 313
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 56 TQQWVTSKTHTLRPETPGPQPPSPC 130
+ +W + +P P P PPSPC
Sbjct: 96 SDKWEVGDNYLWQPLPPPPPPPSPC 120
>02_01_0358 - 2575858-2576796
Length = 312
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 56 TQQWVTSKTHTLRPETPGPQPPSPC 130
+ +W + +P P P PPSPC
Sbjct: 96 SDKWEVGDNYLWQPLPPPPPPPSPC 120
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 349 ISDDGYLTLMADNGDLREDLKIP 417
+ DDG + M NGD RE LK P
Sbjct: 92 VKDDGVINSMTRNGDRRELLKGP 114
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 269 LPLKISIPTK*TLAWPCFPVLDVDISTILHGRPFSITKPFLRRA 138
L L +++PT+ + VL D+STI + P +TK F+ R+
Sbjct: 204 LQLALNVPTEESSLTFGDRVLKNDLSTIRNDSPLLLTKTFMHRS 247
>12_01_0034 -
288931-289201,289284-289398,289524-289639,289805-289939,
290062-290129,290374-290484
Length = 271
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 349 ISDDGYLTLMADNGDLREDLKIP 417
+ DDG + M NGD RE LK P
Sbjct: 89 VKDDGVINSMTRNGDPRELLKGP 111
>03_05_0305 + 22955142-22955342,22955485-22955583
Length = 99
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 379 PSGSGSHH-PRYQSVGSLRASREVRPC 302
P+ SG HH P + G+ ASR V C
Sbjct: 13 PASSGEHHKPTVEECGTASASRRVVTC 39
>01_06_0343 + 28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 367 GSHHPRYQSVGSLRASREVRPCCV 296
G H+ Y VG +A EV PC +
Sbjct: 1212 GPHYAHYDLVGGRKAVHEVYPCII 1235
>01_05_0423 + 22032940-22033695
Length = 251
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 71 TSKTHTLRPETPGPQPPSPCNVRPC 145
TS T T P P P PP P + + C
Sbjct: 17 TSNTSTTPPPQPPPPPPPPPHPQAC 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,845,499
Number of Sequences: 37544
Number of extensions: 319865
Number of successful extensions: 1224
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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