Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17c19
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.53 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.70 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   3.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   8.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   8.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   8.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.53
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +3

Query: 87  LYRCNRNFLRTANCKAMFLLR---IFVHIAFLFSIFDIYF 197
           LY  N NF  +     + LL+   +F +  +LF+++ IY+
Sbjct: 122 LYTINYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIYY 161


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.70
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +1

Query: 154 LYILHFYSLFLIYILNLQL*KTFIL*NPFTMLLPIVLFCSLLMVYV 291
           L I HF+  F+I+ ++L     FI  N   + L  + + +L ++++
Sbjct: 164 LCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFL 209



 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 160 ILHFYSLFLIYILNL 204
           I +FYS F+I+ ++L
Sbjct: 212 IYYFYSAFIIFTIHL 226


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -2

Query: 386 CRNLSSRYTPSSFRICYRP*EWHSGMIYKRFCT*TINNEQNKTIG 252
           CR+ + R     + +C+RP   ++ ++ K F     +N  N+  G
Sbjct: 389 CRSSTFRNNRDEYNVCFRP--RNNSILIKNFNDSPESNRSNEIDG 431


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 239 NGFYRMNVFHNWR 201
           +GF+    +HNWR
Sbjct: 491 HGFWGTTEYHNWR 503


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 259 VLFCSLLMVYVQNLL*IIPLCH 324
           ++F ++++ Y  NLL  +  CH
Sbjct: 179 IVFMTVILPYFINLLMELQYCH 200


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 52  CNINDLIYQ*NNYIGVIATF 111
           C + + IY   N++ V++TF
Sbjct: 225 CQVANSIYGFQNFLFVLSTF 244


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 259 VLFCSLLMVYVQNLL*IIPLCH 324
           ++F ++++ Y  NLL  +  CH
Sbjct: 179 IVFMTVILPYFINLLMELQYCH 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,162
Number of Sequences: 336
Number of extensions: 1871
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)