Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17c19
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   7.5  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    20   10.0 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   10.0 

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 291 HVNHQQRTKQDDRQQHRE 238
           H  +QQ+ +Q  RQQ R+
Sbjct: 160 HRPYQQQQQQQQRQQQRQ 177


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 230 YRMNVFHNWRFKIY 189
           + MNV H W++  Y
Sbjct: 33  HSMNVIHEWKYIDY 46


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 224 MNVFHNWRFKIY 189
           MNV H W++  Y
Sbjct: 35  MNVIHEWKYLDY 46


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 358 HLPLEFATDLKNGIVV*FTKDSARKPS 278
           ++P  F    +  IV+  TK+   +PS
Sbjct: 29  YIPTRFRRQERGSIVIQGTKEGKSRPS 55


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 235 PFTMLLPIVLFCSLLMVYVQNLL 303
           P  +   +VL CS   VYV +++
Sbjct: 148 PLRLSFCVVLACSTATVYVMSVV 170


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,871
Number of Sequences: 438
Number of extensions: 2348
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)