Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17c15
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 161 9e-40
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 161 9e-40
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 161 9e-40
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 161 9e-40
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 161 9e-40
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 161 9e-40
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 161 9e-40
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 161 9e-40
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 161 9e-40
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 160 2e-39
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 160 2e-39
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 160 2e-39
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 160 2e-39
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 160 2e-39
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 160 2e-39
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 160 2e-39
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 160 2e-39
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 160 2e-39
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 160 3e-39
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 154 1e-37
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 154 1e-37
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 154 1e-37
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 151 1e-36
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 95 2e-19
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 65 1e-10
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 65 1e-10
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 65 1e-10
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 65 1e-10
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 65 1e-10
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 65 1e-10
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 65 1e-10
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 65 1e-10
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 65 1e-10
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 60 6e-09
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 60 6e-09
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 60 6e-09
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 60 6e-09
AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy ch... 31 2.2
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 2.9
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 2.9
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 2.9
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 2.9
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 2.9
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 2.9
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 31 2.9
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 2.9
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 2.9
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 2.9
J00112-1|AAA52291.1| 60|Homo sapiens pro-alpha-1 collagen type... 29 6.8
DQ323928-1|ABC54712.1| 410|Homo sapiens Spred3 protein. 29 6.8
AF119162-4|AAF28849.1| 844|Homo sapiens neuregulin 2 isoform 2 ... 29 9.0
AF119162-3|AAF28851.1| 852|Homo sapiens neuregulin 2 isoform 4 ... 29 9.0
AF119162-2|AAF28848.1| 850|Homo sapiens neuregulin 2 isoform 1 ... 29 9.0
AF119162-1|AAF28850.1| 858|Homo sapiens neuregulin 2 isoform 3 ... 29 9.0
AB005060-1|BAA23417.1| 850|Homo sapiens NTAK protein. 29 9.0
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 216 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 257
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 161 bits (392), Expect = 9e-40
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 79 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 120
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 113 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 155
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 153
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 154 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 196
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 160 bits (389), Expect = 2e-39
Identities = 76/103 (73%), Positives = 86/103 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 160 bits (389), Expect = 2e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 160 bits (388), Expect = 3e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 494
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGEEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 154 bits (374), Expect = 1e-37
Identities = 73/100 (73%), Positives = 83/100 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPR 479
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 154 bits (374), Expect = 1e-37
Identities = 73/100 (73%), Positives = 83/100 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPR 479
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 154 bits (374), Expect = 1e-37
Identities = 73/100 (73%), Positives = 83/100 (83%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPR 479
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 151 bits (366), Expect = 1e-36
Identities = 74/103 (71%), Positives = 84/103 (81%)
Frame = +3
Query: 180 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 359
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 360 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 488
V GEKG +AA VTGPGG PV+GS YAAD R ++R+Y PR G
Sbjct: 110 VEGEKGAKAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRPRG 149
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 94.7 bits (225), Expect = 2e-19
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +3
Query: 270 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 449
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 450 RGYHRQYFPR 479
+ R++ PR
Sbjct: 83 KS--RRFIPR 90
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 357 VVAGEKGFEAAGVTGPGGEPVKGS 428
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 59.7 bits (138), Expect = 6e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 357 VVAGEKGFEAAGVTGPGG 410
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 59.7 bits (138), Expect = 6e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 357 VVAGEKGFEAAGVTGPGG 410
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 59.7 bits (138), Expect = 6e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 357 VVAGEKGFEAAGVTGPGG 410
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 59.7 bits (138), Expect = 6e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +3
Query: 198 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 356
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 357 VVAGEKGFEAAGVTGPGG 410
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy chain
protein.
Length = 143
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/48 (43%), Positives = 22/48 (45%)
Frame = +1
Query: 226 RVDMVSSTGMTPRKMCLCIRLPSPVTTHVRLCARSATERRWSLPWLPG 369
RV M S T +T M L L S T V CAR R W PW PG
Sbjct: 86 RVAMTSDTSVTTAYMELT-SLTSDDTA-VYFCARGDVNRNWLDPWGPG 131
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 366 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 455
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 366 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 455
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 366 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 455
GE+GF G+ GP GEP K P A RG
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERG 571
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 293
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 293
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 366 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 455
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 293
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 366 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 455
GE+GF G+ GP GEP K P A RG
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERG 992
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 366 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 455
GE+GF G+ GP GEP K P A RG
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERG 998
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 293
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>J00112-1|AAA52291.1| 60|Homo sapiens pro-alpha-1 collagen type 1
protein.
Length = 60
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 366 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 455
GE+GF G GP GEP K P A RG
Sbjct: 4 GERGFP--GPLGPSGEPGKQGPSGASGERG 31
>DQ323928-1|ABC54712.1| 410|Homo sapiens Spred3 protein.
Length = 410
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 399 GPGGEPVKGSPYAADKRRGYH-RQYFPRQGGGRG 497
GP P K SP A + R H R F R+ GRG
Sbjct: 279 GPSSAPAKASPEAEEAARCVHCRALFRRRADGRG 312
>AF119162-4|AAF28849.1| 844|Homo sapiens neuregulin 2 isoform 2
protein.
Length = 844
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 399 GPGGEPVKGSPYAADKRRGYHRQYFPRQGGG 491
GPG P G AD +R Y Y+P G G
Sbjct: 649 GPGPGPGPGPGPGADMQRSYDSYYYPAAGPG 679
>AF119162-3|AAF28851.1| 852|Homo sapiens neuregulin 2 isoform 4
protein.
Length = 852
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 399 GPGGEPVKGSPYAADKRRGYHRQYFPRQGGG 491
GPG P G AD +R Y Y+P G G
Sbjct: 657 GPGPGPGPGPGPGADMQRSYDSYYYPAAGPG 687
>AF119162-2|AAF28848.1| 850|Homo sapiens neuregulin 2 isoform 1
protein.
Length = 850
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 399 GPGGEPVKGSPYAADKRRGYHRQYFPRQGGG 491
GPG P G AD +R Y Y+P G G
Sbjct: 655 GPGPGPGPGPGPGADMQRSYDSYYYPAAGPG 685
>AF119162-1|AAF28850.1| 858|Homo sapiens neuregulin 2 isoform 3
protein.
Length = 858
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 399 GPGGEPVKGSPYAADKRRGYHRQYFPRQGGG 491
GPG P G AD +R Y Y+P G G
Sbjct: 663 GPGPGPGPGPGPGADMQRSYDSYYYPAAGPG 693
>AB005060-1|BAA23417.1| 850|Homo sapiens NTAK protein.
Length = 850
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 399 GPGGEPVKGSPYAADKRRGYHRQYFPRQGGG 491
GPG P G AD +R Y Y+P G G
Sbjct: 655 GPGPGPGPGPGPGADMQRSYDSYYYPAAGPG 685
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,230,417
Number of Sequences: 237096
Number of extensions: 1334510
Number of successful extensions: 4290
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 4007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4277
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -