Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17c13
(613 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p pro... 62 4e-10
AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA ... 62 4e-10
AE014298-795|AAF46081.1| 507|Drosophila melanogaster CG15769-PA... 41 0.001
AY113471-1|AAM29476.1| 445|Drosophila melanogaster RE43153p pro... 29 4.9
AY071562-1|AAL49184.1| 416|Drosophila melanogaster RE62864p pro... 29 4.9
AE014298-794|AAF46080.2| 445|Drosophila melanogaster CG3097-PA ... 29 4.9
AE014296-1161|AAF50637.2| 416|Drosophila melanogaster CG14820-P... 29 4.9
L26082-1|AAA88789.1| 771|Drosophila melanogaster semaphorin-I p... 28 8.6
AY113455-1|AAM29460.1| 219|Drosophila melanogaster RE36155p pro... 28 8.6
AE014134-1545|ABI31302.1| 219|Drosophila melanogaster CG18405-P... 28 8.6
AE014134-1544|AAF52696.2| 899|Drosophila melanogaster CG18405-P... 28 8.6
AE014134-1543|AAN10677.2| 1019|Drosophila melanogaster CG18405-P... 28 8.6
>BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p
protein.
Length = 1132
Score = 62.5 bits (145), Expect = 4e-10
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +2
Query: 494 RENPPLDNDEIELQDRRGHRMTWKQYHRLEDIYGFMDYLA 613
+ENPP + ELQ+R+GHR+TW+ YHRLEDI+GF+DY+A
Sbjct: 797 KENPPAEKIA-ELQNRKGHRLTWQAYHRLEDIHGFIDYMA 835
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +1
Query: 271 YSGSQVWQVSTTKSGARQVIGRLRRRNLISTWGGNQSSVDILIKPNVVENITRVFKRESI 450
Y G+QVW++ +++ L+ + W + VD L+KP V+ R + ++
Sbjct: 723 YDGAQVWRIVVQTDKDKRMADELQSKYDGQLWKEVKQEVDYLLKPQVLAAAERHIRAANL 782
Query: 451 DYNVVIEDLQKRINE 495
V+I++LQ+ I +
Sbjct: 783 SRIVLIDNLQRVIEK 797
>AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA
protein.
Length = 1132
Score = 62.5 bits (145), Expect = 4e-10
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +2
Query: 494 RENPPLDNDEIELQDRRGHRMTWKQYHRLEDIYGFMDYLA 613
+ENPP + ELQ+R+GHR+TW+ YHRLEDI+GF+DY+A
Sbjct: 797 KENPPAEKIA-ELQNRKGHRLTWQAYHRLEDIHGFIDYMA 835
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +1
Query: 271 YSGSQVWQVSTTKSGARQVIGRLRRRNLISTWGGNQSSVDILIKPNVVENITRVFKRESI 450
Y G+QVW++ +++ L+ + W + VD L+KP V+ R + ++
Sbjct: 723 YDGAQVWRIVVQTDKDKRMADELQSKYDGQLWKEVKQEVDYLLKPQVLAAAERHIRAANL 782
Query: 451 DYNVVIEDLQKRINE 495
V+I++LQ+ I +
Sbjct: 783 SRIVLIDNLQRVIEK 797
>AE014298-795|AAF46081.1| 507|Drosophila melanogaster CG15769-PA
protein.
Length = 507
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +1
Query: 271 YSGSQVWQVSTTKSGARQVIGRLRRRNLISTWGGNQSSVDILIKPNVVENITRVFKRESI 450
Y G Q+W+V T+ ++ R W NQ +DILI+ V + + +
Sbjct: 93 YYGFQLWKVHETRLEQPELRAFWRHFGS-EVWNINQDGIDILIEQRNVADARKFMDKVGY 151
Query: 451 DYNVVIEDLQKRINE 495
YN++I+D++ I+E
Sbjct: 152 SYNIMIDDIESAIDE 166
>AY113471-1|AAM29476.1| 445|Drosophila melanogaster RE43153p
protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 554 MTWKQYHRLEDIYGFM 601
M WK YH LE IY FM
Sbjct: 143 MHWKDYHDLETIYSFM 158
>AY071562-1|AAL49184.1| 416|Drosophila melanogaster RE62864p
protein.
Length = 416
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +2
Query: 500 NPPLDNDEIELQDRRGHR----MTWKQYHRLEDIYGFMDYL 610
N +DN + + +R + M W Q+H LE+IY ++D +
Sbjct: 88 NLKIDNVQTHIDAQRPKQRITSMEWTQFHTLEEIYAWLDVI 128
>AE014298-794|AAF46080.2| 445|Drosophila melanogaster CG3097-PA
protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 554 MTWKQYHRLEDIYGFM 601
M WK YH LE IY FM
Sbjct: 143 MHWKDYHDLETIYSFM 158
>AE014296-1161|AAF50637.2| 416|Drosophila melanogaster CG14820-PA
protein.
Length = 416
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +2
Query: 500 NPPLDNDEIELQDRRGHR----MTWKQYHRLEDIYGFMDYL 610
N +DN + + +R + M W Q+H LE+IY ++D +
Sbjct: 88 NLKIDNVQTHIDAQRPKQRITSMEWTQFHTLEEIYAWLDVI 128
>L26082-1|AAA88789.1| 771|Drosophila melanogaster semaphorin-I
protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 113 CGHSS--PGCSSLIRGELRTTVRAAKNNTTVCLLDP 12
CG +S P C++ I + T+ A KN VC DP
Sbjct: 120 CGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDP 155
>AY113455-1|AAM29460.1| 219|Drosophila melanogaster RE36155p
protein.
Length = 219
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 113 CGHSS--PGCSSLIRGELRTTVRAAKNNTTVCLLDP 12
CG +S P C++ I + T+ A KN VC DP
Sbjct: 169 CGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDP 204
>AE014134-1545|ABI31302.1| 219|Drosophila melanogaster CG18405-PC,
isoform C protein.
Length = 219
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 113 CGHSS--PGCSSLIRGELRTTVRAAKNNTTVCLLDP 12
CG +S P C++ I + T+ A KN VC DP
Sbjct: 169 CGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDP 204
>AE014134-1544|AAF52696.2| 899|Drosophila melanogaster CG18405-PA,
isoform A protein.
Length = 899
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 113 CGHSS--PGCSSLIRGELRTTVRAAKNNTTVCLLDP 12
CG +S P C++ I + T+ A KN VC DP
Sbjct: 169 CGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDP 204
>AE014134-1543|AAN10677.2| 1019|Drosophila melanogaster CG18405-PB,
isoform B protein.
Length = 1019
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 113 CGHSS--PGCSSLIRGELRTTVRAAKNNTTVCLLDP 12
CG +S P C++ I + T+ A KN VC DP
Sbjct: 169 CGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDP 204
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,620,152
Number of Sequences: 53049
Number of extensions: 471905
Number of successful extensions: 1277
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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