Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17c09
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   2.2  
AF042732-1|AAC18056.1|  114|Anopheles gambiae unknown protein pr...    24   3.0  
AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding pr...    24   3.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.8  
AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450 pr...    23   9.0  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 14/62 (22%), Positives = 26/62 (41%)
 Frame = -3

Query: 471 SQNE*PSSSPSFHNYGRHEREDSCTQKTYSQSPFPSVFFRQVSSRDMSYSVSIVKPAEYQ 292
           +Q   PS      N            +T   SPFPS   +Q+  ++ + ++ + K   +Q
Sbjct: 156 AQTPDPSFQSQLMNQTSSFHRGGAAIRTAPASPFPSAPNQQIIYKEQTANLQVQKVPAFQ 215

Query: 291 AL 286
           A+
Sbjct: 216 AM 217


>AF042732-1|AAC18056.1|  114|Anopheles gambiae unknown protein
           protein.
          Length = 114

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 549 SWGGTHRASTIIRAGIVGPSP 487
           +W G +  +T    GIVGP P
Sbjct: 34  AWAGYYEFNTFDENGIVGPHP 54


>AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding
           protein protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -1

Query: 176 CFVVLTI*VTARLRQTRMVYALHTANRPMMPKTYRWGIRNNLDT 45
           C+V   + +T   ++ ++ Y        ++P+TYR   R  LD+
Sbjct: 80  CYVACLMDLTQTSKKGKLNYDAAVKQIEILPETYRQPFRLGLDS 123


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 258  RYIRLVRINARPDTQRVLLW 317
            R +RLV++ AR +  R LLW
Sbjct: 1281 RVMRLVKLLARGEGIRTLLW 1300


>AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450
           protein.
          Length = 107

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +1

Query: 175 HEDAHFDPDACPDDSEILTNGTVSLKPYAIFDWSESTQGLILSGFYYGY 321
           H   H  PD    D E   +G     PYA   +S   +  I  G+ + Y
Sbjct: 14  HRLEHIYPDPERFDPERFGDGAPHQNPYAFLPFSAGPRNCI--GYKFAY 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,884
Number of Sequences: 2352
Number of extensions: 14696
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)