Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17c07
         (305 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146799-1|AAI46800.1|  923|Homo sapiens EML4 protein protein.         29   3.5  
BC023522-1|AAH23522.1|  202|Homo sapiens EML4 protein protein.         29   3.5  
AK001804-1|BAA91919.1|  125|Homo sapiens protein ( Homo sapiens ...    29   3.5  
AF177377-1|AAG09279.2|  981|Homo sapiens cytoplasmic protein pro...    29   3.5  
AC006038-1|AAY15086.1|  911|Homo sapiens unknown protein.              29   3.5  

>BC146799-1|AAI46800.1|  923|Homo sapiens EML4 protein protein.
          Length = 923

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 136 SLIEWSDYEKMSAPIIITVPNNYLVKE--EDSDMILDVASPSPSRKRRLDHLTWEEKK 303
           S+I+W   EK+S P   TV +  L K     ++ ++   +P+P   + L+    EE +
Sbjct: 800 SIIQWKLVEKLSLPQNETVADTTLTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESR 857


>BC023522-1|AAH23522.1|  202|Homo sapiens EML4 protein protein.
          Length = 202

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 136 SLIEWSDYEKMSAPIIITVPNNYLVKE--EDSDMILDVASPSPSRKRRLDHLTWEEKK 303
           S+I+W   EK+S P   TV +  L K     ++ ++   +P+P   + L+    EE +
Sbjct: 79  SIIQWKLVEKLSLPQNETVADTTLTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESR 136


>AK001804-1|BAA91919.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10942 fis, clone OVARC1001296. ).
          Length = 125

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 136 SLIEWSDYEKMSAPIIITVPNNYLVKE--EDSDMILDVASPSPSRKRRLDHLTWEEKK 303
           S+I+W   EK+S P   TV +  L K     ++ ++   +P+P   + L+    EE +
Sbjct: 2   SIIQWKLVEKLSLPQNETVADTTLTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESR 59


>AF177377-1|AAG09279.2|  981|Homo sapiens cytoplasmic protein protein.
          Length = 981

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 136  SLIEWSDYEKMSAPIIITVPNNYLVKE--EDSDMILDVASPSPSRKRRLDHLTWEEKK 303
            S+I+W   EK+S P   TV +  L K     ++ ++   +P+P   + L+    EE +
Sbjct: 858  SIIQWKLVEKLSLPQNETVADTTLTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESR 915


>AC006038-1|AAY15086.1|  911|Homo sapiens unknown protein.
          Length = 911

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 136 SLIEWSDYEKMSAPIIITVPNNYLVKE--EDSDMILDVASPSPSRKRRLDHLTWEEKK 303
           S+I+W   EK+S P   TV +  L K     ++ ++   +P+P   + L+    EE +
Sbjct: 788 SIIQWKLVEKLSLPQNETVADTTLTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESR 845


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,086,100
Number of Sequences: 237096
Number of extensions: 685571
Number of successful extensions: 5112
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5105
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)