Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17c07
         (305 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021380-1|AAX33528.1|  307|Drosophila melanogaster LD42070p pro...    35   0.023
AE013599-3140|AAF46681.2|  307|Drosophila melanogaster CG9415-PA...    35   0.023
AE013599-3139|AAM70855.2|  488|Drosophila melanogaster CG9415-PB...    35   0.023
AY121660-1|AAM51987.1|  670|Drosophila melanogaster RE06985p pro...    29   0.85 
AL031765-5|CAA21123.1|  670|Drosophila melanogaster EG:22E5.11 p...    29   0.85 
AE014298-314|AAF45709.2|  670|Drosophila melanogaster CG4322-PA ...    29   0.85 
AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...    26   7.9  

>BT021380-1|AAX33528.1|  307|Drosophila melanogaster LD42070p
           protein.
          Length = 307

 Score = 34.7 bits (76), Expect = 0.023
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 244 ASPSPSRKRRLDHLTWEEK 300
           AS   ++KRRLDHLTWEEK
Sbjct: 65  ASQPKAKKRRLDHLTWEEK 83


>AE013599-3140|AAF46681.2|  307|Drosophila melanogaster CG9415-PA,
           isoform A protein.
          Length = 307

 Score = 34.7 bits (76), Expect = 0.023
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 244 ASPSPSRKRRLDHLTWEEK 300
           AS   ++KRRLDHLTWEEK
Sbjct: 65  ASQPKAKKRRLDHLTWEEK 83


>AE013599-3139|AAM70855.2|  488|Drosophila melanogaster CG9415-PB,
           isoform B protein.
          Length = 488

 Score = 34.7 bits (76), Expect = 0.023
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 244 ASPSPSRKRRLDHLTWEEK 300
           AS   ++KRRLDHLTWEEK
Sbjct: 65  ASQPKAKKRRLDHLTWEEK 83


>AY121660-1|AAM51987.1|  670|Drosophila melanogaster RE06985p
           protein.
          Length = 670

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 3/19 (15%)
 Frame = +3

Query: 201 LLGEGGRFGYDSR---CSV 248
           LLGE GRFGYDSR   CS+
Sbjct: 172 LLGEWGRFGYDSRLQTCSI 190


>AL031765-5|CAA21123.1|  670|Drosophila melanogaster EG:22E5.11
           protein.
          Length = 670

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 3/19 (15%)
 Frame = +3

Query: 201 LLGEGGRFGYDSR---CSV 248
           LLGE GRFGYDSR   CS+
Sbjct: 172 LLGEWGRFGYDSRLQTCSI 190


>AE014298-314|AAF45709.2|  670|Drosophila melanogaster CG4322-PA
           protein.
          Length = 670

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 3/19 (15%)
 Frame = +3

Query: 201 LLGEGGRFGYDSR---CSV 248
           LLGE GRFGYDSR   CS+
Sbjct: 172 LLGEWGRFGYDSRLQTCSI 190


>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
           protein.
          Length = 1271

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 175 PIIITVPNNYLVKEEDSDMILDVASPSPSRKRR 273
           P I+T    YLV   D++ +L V +  P+RKRR
Sbjct: 462 PHIVTKGYEYLVNFSDTEQLL-VNAERPTRKRR 493


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,900,700
Number of Sequences: 53049
Number of extensions: 217817
Number of successful extensions: 494
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)