Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17b24
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB018288-1|BAA34465.1| 909|Homo sapiens KIAA0745 protein protein. 30 4.3
L77864-1|AAB93631.1| 710|Homo sapiens stat-like protein protein. 29 7.4
EF103274-1|ABL07489.1| 492|Homo sapiens amyloid beta A4 precurs... 29 7.4
BX538185-1|CAD98057.1| 502|Homo sapiens hypothetical protein pr... 29 7.4
BC010854-1|AAH10854.1| 708|Homo sapiens amyloid beta (A4) precu... 29 7.4
AF394214-1|AAL79526.1| 712|Homo sapiens adaptor protein FE65a2 ... 29 7.4
AF029234-1|AAC79942.1| 710|Homo sapiens Fe65 protein protein. 29 7.4
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 29 9.8
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 29 9.8
U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein. 29 9.8
>AB018288-1|BAA34465.1| 909|Homo sapiens KIAA0745 protein protein.
Length = 909
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 82 LCMLQIPTSLTTFWRSSFTIASSLPITTV 168
LC +QIPTS WRS+F +S+L ++T+
Sbjct: 247 LCTVQIPTS----WRSAFLDSSTLQLSTI 271
>L77864-1|AAB93631.1| 710|Homo sapiens stat-like protein protein.
Length = 710
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -1
Query: 446 VAEGKSAIVAVNIITQRQSETVALVHKLNGVFGEDKSELNWETITDDVLGALEPKLIGVL 267
+A G+S++ N I Q L ++G +GE K L + D+ L +EP+ +L
Sbjct: 385 LAPGRSSVAVNNCIRQLSYHKNNLHDPMSGGWGEGKDLL--LQLEDETLKLVEPQSQALL 442
Query: 266 HAVHLV 249
HA ++
Sbjct: 443 HAQPII 448
>EF103274-1|ABL07489.1| 492|Homo sapiens amyloid beta A4 precursor
protein-binding family B member 1 transcript variant
protein.
Length = 492
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -1
Query: 446 VAEGKSAIVAVNIITQRQSETVALVHKLNGVFGEDKSELNWETITDDVLGALEPKLIGVL 267
+A G+S++ N I Q L ++G +GE K L + D+ L +EP+ +L
Sbjct: 167 LAPGRSSVAVNNCIRQLSYHKNNLHDPMSGGWGEGKDLL--LQLEDETLKLVEPQSQALL 224
Query: 266 HAVHLV 249
HA ++
Sbjct: 225 HAQPII 230
>BX538185-1|CAD98057.1| 502|Homo sapiens hypothetical protein
protein.
Length = 502
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -1
Query: 446 VAEGKSAIVAVNIITQRQSETVALVHKLNGVFGEDKSELNWETITDDVLGALEPKLIGVL 267
+A G+S++ N I Q L ++G +GE K L + D+ L +EP+ +L
Sbjct: 177 LAPGRSSVAVNNCIRQLSYHKNNLHDPMSGGWGEGKDLL--LQLEDETLKLVEPQSQALL 234
Query: 266 HAVHLV 249
HA ++
Sbjct: 235 HAQPII 240
>BC010854-1|AAH10854.1| 708|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1 (Fe65)
protein.
Length = 708
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -1
Query: 446 VAEGKSAIVAVNIITQRQSETVALVHKLNGVFGEDKSELNWETITDDVLGALEPKLIGVL 267
+A G+S++ N I Q L ++G +GE K L + D+ L +EP+ +L
Sbjct: 385 LAPGRSSVAVNNCIRQLSYHKNNLHDPMSGGWGEGKDLL--LQLEDETLKLVEPQSQALL 442
Query: 266 HAVHLV 249
HA ++
Sbjct: 443 HAQPII 448
>AF394214-1|AAL79526.1| 712|Homo sapiens adaptor protein FE65a2
protein.
Length = 712
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -1
Query: 446 VAEGKSAIVAVNIITQRQSETVALVHKLNGVFGEDKSELNWETITDDVLGALEPKLIGVL 267
+A G+S++ N I Q L ++G +GE K L + D+ L +EP+ +L
Sbjct: 385 LAPGRSSVAVNNCIRQLSYHKNNLHDPMSGGWGEGKDLL--LQLEDETLKLVEPQSQALL 442
Query: 266 HAVHLV 249
HA ++
Sbjct: 443 HAQPII 448
>AF029234-1|AAC79942.1| 710|Homo sapiens Fe65 protein protein.
Length = 710
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -1
Query: 446 VAEGKSAIVAVNIITQRQSETVALVHKLNGVFGEDKSELNWETITDDVLGALEPKLIGVL 267
+A G+S++ N I Q L ++G +GE K L + D+ L +EP+ +L
Sbjct: 385 LAPGRSSVAVNNCIRQLSYHKNNLHDPMSGGWGEGKDLL--LQLEDETLKLVEPQSQALL 442
Query: 266 HAVHLV 249
HA ++
Sbjct: 443 HAQPII 448
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 120 LEEQLYNSIVVADYDSAVEKSKHLYEEKKSEVITNV 227
L QL NSI +++ ++A+ + Y+E+K E++ V
Sbjct: 1379 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1414
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 120 LEEQLYNSIVVADYDSAVEKSKHLYEEKKSEVITNV 227
L QL NSI +++ ++A+ + Y+E+K E++ V
Sbjct: 1379 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1414
>U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.
Length = 2083
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 120 LEEQLYNSIVVADYDSAVEKSKHLYEEKKSEVITNV 227
L QL NSI +++ ++A+ + Y+E+K E++ V
Sbjct: 1234 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,253,205
Number of Sequences: 237096
Number of extensions: 1003761
Number of successful extensions: 2936
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2936
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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