Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17b21
(574 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 159 2e-40
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 154 8e-39
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 98 7e-22
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 85 7e-18
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 85 9e-18
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 52 6e-08
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 34 0.013
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 33 0.039
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 28 1.1
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 27 1.5
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 27 1.5
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 27 2.6
SPBC839.03c |||neddylation protein Dcn1|Schizosaccharomyces pomb... 26 3.4
SPAC9E9.17c |||dubiuos|Schizosaccharomyces pombe|chr 1|||Manual 26 4.5
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.9
SPAC12B10.07 |acp1||F-actin capping protein alpha subunit|Schizo... 25 7.9
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 7.9
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 25 7.9
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 25 7.9
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 159 bits (387), Expect = 2e-40
Identities = 75/151 (49%), Positives = 100/151 (66%)
Frame = +3
Query: 120 KCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 299
K P LGLGTW+S+P + AVK A+ GYRHID A +YGNE EVG+ I KE V R+
Sbjct: 23 KIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGI----KESGVPRK 78
Query: 300 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 479
D+++TSKLW H P+ V AL++TL +L + YLD YLIHWP ++K FP D+ G +
Sbjct: 79 DIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPKDKDGNL 138
Query: 480 QFSDVDYVDTWKAMEPLVKEGLVKSIGVSNF 572
+ +TWKAME L++ G V+ IG+SNF
Sbjct: 139 IYEKNPIEETWKAMEKLLETGKVRHIGLSNF 169
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 154 bits (374), Expect = 8e-39
Identities = 73/151 (48%), Positives = 100/151 (66%)
Frame = +3
Query: 120 KCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 299
K P +GLGTW+S E AV A+ GYRHID A++YGNEKE+GE I +E V R
Sbjct: 22 KIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGI----RESGVPRT 77
Query: 300 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 479
D+++TSKLW HR LV AL++TL +LN++Y+D YLIHWP A P ++ G++
Sbjct: 78 DIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEELPRNEKGEL 137
Query: 480 QFSDVDYVDTWKAMEPLVKEGLVKSIGVSNF 572
+ DV +TW+AME L++ G V+ IG+SNF
Sbjct: 138 IYEDVPIEETWQAMEELLETGKVRYIGISNF 168
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 98.3 bits (234), Expect = 7e-22
Identities = 68/159 (42%), Positives = 89/159 (55%), Gaps = 6/159 (3%)
Frame = +3
Query: 114 ELKCPILGLGT--WKSKPGEVTQ----AVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKI 275
++ P G+GT +K + GE+ + +VK+A+ G+ HIDCA VYGNE+EVG A +
Sbjct: 9 KIPVPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVA----L 64
Query: 276 KEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLF 455
KE V R LFITSK+ H D + AL E+L L YLDLYL+H P + E
Sbjct: 65 KEANVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYEK---- 117
Query: 456 PTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNF 572
KI S + WKAME + GLV S+GVSNF
Sbjct: 118 ------KIPIS-----EGWKAMETALGTGLVHSVGVSNF 145
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 85.0 bits (201), Expect = 7e-18
Identities = 53/159 (33%), Positives = 81/159 (50%)
Frame = +3
Query: 96 FVEFNNELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKI 275
FV+ NN LKCP G++ + +V A+ GYRHID A +Y NE + G AI +
Sbjct: 5 FVKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFM 64
Query: 276 KEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLF 455
+E RED++ TSKL N ++ ++ + Y+DL+L+H P
Sbjct: 65 EETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSPYG-------- 115
Query: 456 PTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNF 572
D +++WKA+E V+EG +++IGVSNF
Sbjct: 116 -------------DRIESWKALEKGVEEGKLRAIGVSNF 141
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 84.6 bits (200), Expect = 9e-18
Identities = 57/158 (36%), Positives = 79/158 (50%)
Frame = +3
Query: 99 VEFNNELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 278
V N + P +G G + K E V A+D GYRHID A VYGNE G+AI +
Sbjct: 11 VTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCE 70
Query: 279 EGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 458
+ V R D+F+TSKL N R A++ +L +L Y+DL+LI P K+
Sbjct: 71 KNNVKRTDIFLTSKLANCSDYYS-TRAAIRSSLHHLGT-YIDLFLIQSPAGGKK------ 122
Query: 459 TDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNF 572
+ +WKAME V G ++S+GVSN+
Sbjct: 123 ------------SRIASWKAMEEFVDSGDIRSVGVSNY 148
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 52.0 bits (119), Expect = 6e-08
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Frame = +3
Query: 93 PFVEFNNELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSK 272
PF + L G ++ K + Q V +A+ +G R ID A Y NEKE +AI
Sbjct: 3 PFSPSQTNFEKEQLCFGVYQLK--DCYQQVIEALSLGIRVIDSAITYRNEKECEQAIQDF 60
Query: 273 IKEGV-VTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGS 449
+ V + RED+ + +K+ ++ + A++++L LD+ LIH P+
Sbjct: 61 CHQNVNIKREDITLITKIPDSLQGFERTWKAVEQSLRRTGRPKLDVVLIHSPK------- 113
Query: 450 LFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNF 572
+P V +++W+A+ KEG + IGVSN+
Sbjct: 114 -WP-----------VRRIESWRALLQHQKEGRINKIGVSNY 142
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 34.3 bits (75), Expect = 0.013
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Frame = +3
Query: 87 SVPFVEFNNE-LKCPILGLGTWKSKPGE------VTQAVKDAIDIGYRHIDCAYVYGN-- 239
+VPF LK LG W + E +K A D+G D A +Y N
Sbjct: 12 NVPFRFLGRSGLKVSAFSLGGWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGN 71
Query: 240 -EKEVGEAITS---KIKEGVVTREDLF-ITSKLWNT--FHRPDLVRGALQETLDNLNVQY 398
E +G+AI E V+T + F +KL NT R ++ G L +L L + Y
Sbjct: 72 SETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEG-LNASLKRLGLPY 130
Query: 399 LDLYLIHWP 425
+D+ + H P
Sbjct: 131 VDVIMAHRP 139
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 32.7 bits (71), Expect = 0.039
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 498 YVDTWKAMEPLVKEGLVKSIGVSNF 572
+VDTWK +E V EG + ++GVS F
Sbjct: 158 WVDTWKLLEEKVGEGKIGTLGVSEF 182
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 309 ITSKLWNTFHRPDLVRGALQET----LDNLNV-QYLDLYLIH 419
+ S+ W T H+ L RGAL E +DN V +Y+ Y I+
Sbjct: 640 VISRTWKTAHKNKLQRGALPEDEGSGVDNFRVKRYVSKYTIN 681
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 27.9 bits (59), Expect = 1.1
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 306 FITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHW 422
+ + + + R +L++ L E L + LD+Y +HW
Sbjct: 123 YFSKEYLTAYRRSELLQNKLHEYQKKLITRVLDMYQLHW 161
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 1.5
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = +3
Query: 468 SGKIQFSDVDYVDTWKAMEPLVK 536
S +++F+ +DY+ W+A+ P+ +
Sbjct: 162 SQRVEFARLDYIKVWRALAPIYR 184
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 27.5 bits (58), Expect = 1.5
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Frame = +3
Query: 165 EVTQAV-KDAIDIGYRHIDCAYVYG---NEKEVGEAI--TSKIKE-GVVTR---EDLFIT 314
E QAV A D+G D + +YG NE+ +G T + KE + T+ E T
Sbjct: 33 EANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPET 92
Query: 315 SKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIH 419
+L + + PD + AL +L L + +DLY +H
Sbjct: 93 GEL-SLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 451 SSRPTNQVKSSSRTSITWTPGRLWSRSSK 537
SS+ ++ VK +S S TWTP L SK
Sbjct: 321 SSKHSSPVKGNSSISSTWTPSNLKIYHSK 349
>SPBC839.03c |||neddylation protein Dcn1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 306 FITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 452
F+ S FHR V GAL L ++ L L + Q ++ D SL
Sbjct: 97 FLKSPRMGEFHRESFVEGAL--NLSTTSLDQLKLAIKEKVQVWRSDASL 143
>SPAC9E9.17c |||dubiuos|Schizosaccharomyces pombe|chr 1|||Manual
Length = 72
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 317 RSYEQIFPRYDSFLNFAGYSFSDFLLVSVNIGTVDVSVANVN 192
RS E + D LN +F+DF ++N+G + +S N
Sbjct: 29 RSREFSVIQKDEELNVLEINFNDFYRTTLNVGELSMSTRKTN 70
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.0 bits (52), Expect = 7.9
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 445 ALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTS 573
A SS T+ V SSS+ S + + L S SS + S +S SPTS
Sbjct: 75 ASSSFITSLVSSSSQQSSS-SSASLTSSSSATLTSSSSASPTS 116
>SPAC12B10.07 |acp1||F-actin capping protein alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 150 KSKPGEVTQAVKDAIDIG 203
+S PGEV Q V D DIG
Sbjct: 12 ESPPGEVNQVVHDIRDIG 29
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 25.0 bits (52), Expect = 7.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 278 LNFAGYSFSDFLLVSVNIGTVDVSVA 201
LNF YSF LL+ N GT D +++
Sbjct: 1443 LNFHDYSFDQQLLLHENSGTWDSALS 1468
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = -1
Query: 424 GQCIRYRSKY*TFRLSRVSCRAPRTKSGR*NVFHSFEVMNRSSLVTTPSLILLVIASPTS 245
G C+RY + Y + S P T S + F S+ TT + + +S TS
Sbjct: 28 GSCVRYTTIYSSGSSEFTSTITPETPSSSSSTFVPISTHTSSATNTTSGQLSISSSSSTS 87
Query: 244 FSF 236
+
Sbjct: 88 SEY 90
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +3
Query: 372 TLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKE 539
T +++ +Y++L H P K L PT+ +I + +Y A L+ +
Sbjct: 44 TANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAANALLSD 99
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,410,723
Number of Sequences: 5004
Number of extensions: 51735
Number of successful extensions: 204
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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