Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17b14
(454 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 195 7e-50
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 195 7e-50
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 195 7e-50
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 195 7e-50
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 195 7e-50
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 195 7e-50
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 195 7e-50
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 195 7e-50
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 195 7e-50
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 193 3e-49
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 138 6e-33
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 128 9e-30
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 123 3e-28
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 94 2e-19
U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein. 31 2.4
AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens ... 31 2.4
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 31 2.4
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 195 bits (475), Expect = 7e-50
Identities = 100/144 (69%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 381
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKA 453
DR YRR+ PG DKKA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKA 140
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 193 bits (470), Expect = 3e-49
Identities = 99/145 (68%), Positives = 109/145 (75%), Gaps = 6/145 (4%)
Frame = +1
Query: 37 KMLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVK 210
+MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVK
Sbjct: 9 QMLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVK 68
Query: 211 EQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPA 378
EQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPA L+RS R ET R P G RP
Sbjct: 69 EQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAILRRS-RPETGRPRPKGLEGERPARLT 127
Query: 379 RSAEDRSAYRRTPAAPGVAPHDKKA 453
R DR YRR+ PG DKKA
Sbjct: 128 RGEADRDTYRRSAVPPGA---DKKA 149
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 138 bits (335), Expect = 6e-33
Identities = 63/78 (80%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Frame = +1
Query: 61 RVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHF 234
R+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKEQFAWRHF
Sbjct: 1 RIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHF 60
Query: 235 YWYLTNEGIEYLRIFLHL 288
YWYLTNEGI+YLR +LHL
Sbjct: 61 YWYLTNEGIQYLRDYLHL 78
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 128 bits (309), Expect = 9e-30
Identities = 73/140 (52%), Positives = 92/140 (65%), Gaps = 16/140 (11%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPK-HTELEKIPNLQVIKAMQSLKSRGYVKEQ 216
MLMP+ AIYE LF+EGVMVAKKD H + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 217 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKR----------SVRTETVR--RGPVG 360
FAW HFYWYLTNEGI +LR +LHLPPEIVPA+L+R + RT V+ +GP+G
Sbjct: 65 FAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRTPHVQAVQGPLG 124
Query: 361 RPDAPARS---AEDRSAYRR 411
P P R E++ YRR
Sbjct: 125 SP--PKRGPLPTEEQRVYRR 142
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 123 bits (296), Expect = 3e-28
Identities = 71/140 (50%), Positives = 91/140 (65%), Gaps = 16/140 (11%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPK-HTELEKIPNLQVIKAMQSLKSRGYVKEQ 216
MLMP+ AIYE LF+EGVMVAKKD H + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 217 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKR----------SVRTETVR--RGPVG 360
FAW HF+WYLTNEGI +LR +LHLPPEIV A+L+R + RT V+ +GP+G
Sbjct: 65 FAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQRVRRPVAMVMPARRTPHVQAVQGPLG 124
Query: 361 RPDAPARS---AEDRSAYRR 411
P P R E++ YRR
Sbjct: 125 SP--PKRGPLPTEEQRLYRR 142
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 93.9 bits (223), Expect = 2e-19
Identities = 46/60 (76%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+N +AIYE LFKEGVMVAKKD H PKH EL + PNL+V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNWIAIYELLFKEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKE 60
>U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein.
Length = 1822
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 244 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYR-RTPA 420
L E ++ R+ LPPE++P S R+ P G PD + S R TP
Sbjct: 1378 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDA-EAPHGPPDDGGAGGKGGSLPRSATPG 1436
Query: 421 APG 429
PG
Sbjct: 1437 PPG 1439
>AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44846 fis, clone BRACE3051144. ).
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -2
Query: 306 RHNFRRKVQEYSQVFNTLIG*VPVKVPPGKLFFDITSGLE*LHSFDNLEVRNLL 145
RH + ++ +++ + +G VPV++ PGKL TSG E L +++V ++L
Sbjct: 118 RHALQGQMVVIAEILDPHVGEVPVEMSPGKL-LPATSGPERLPGLHDVKVGHIL 170
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 244 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYR-RTPA 420
L E ++ R+ LPPE++P S R+ P G PD + S R TP
Sbjct: 1377 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDA-EAPHGPPDDGGAGGKGGSLPRSATPG 1435
Query: 421 APG 429
PG
Sbjct: 1436 PPG 1438
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,739,933
Number of Sequences: 237096
Number of extensions: 1357833
Number of successful extensions: 4870
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4794
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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