Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17b11
         (597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030270-1|AAH30270.1|  113|Homo sapiens chromosome 17 open read...   104   3e-22
AY462870-1|AAS58864.1|  452|Homo sapiens POTE8B protein.               34   0.33 
AY462869-1|AAS58863.1|  498|Homo sapiens POTE8A protein.               34   0.33 
CR545463-1|CAM28350.1|  545|Homo sapiens protein expressed in pr...    33   0.77 
AY466021-1|AAS58873.1|  288|Homo sapiens POTE22 protein.               33   0.77 
AY465171-1|AAS58870.1|  594|Homo sapiens POTE14B protein.              33   0.77 
D31887-1|BAA06685.1|  531|Homo sapiens KIAA0062 protein.               32   1.3  
BC015770-1|AAH15770.1|  481|Homo sapiens SLC39A14 protein protein.     32   1.3  
AK172810-1|BAD18780.1|  492|Homo sapiens protein ( Homo sapiens ...    32   1.3  

>BC030270-1|AAH30270.1|  113|Homo sapiens chromosome 17 open reading
           frame 61 protein.
          Length = 113

 Score =  104 bits (249), Expect = 3e-22
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
 Frame = +3

Query: 228 LAQEAGPFVRLAGLSGAAAVILGAMGAHRT-FPETEAKDDLKKIFETANRFHFLHTLALV 404
           +A  A  F RL  LSGAAA+   + GAH   FP+   K+    +F+ AN+ HFLH+LAL+
Sbjct: 1   MAGPAAAFRRLGALSGAAALGFASYGAHGAQFPDAYGKE----LFDKANKHHFLHSLALL 56

Query: 405 TVPLCRRPYIAGAFFIAGMGMFCGTCYYHAFTGDRKLRQVTPLGGTCLILGWIAM 569
            VP CR+P  AG    +G  +FC + YY A +GD  ++ + P GGT L+LGW+A+
Sbjct: 57  GVPHCRKPLWAGLLLASGTTLFCTSFYYQALSGDPSIQTLAPAGGTLLLLGWLAL 111


>AY462870-1|AAS58864.1|  452|Homo sapiens POTE8B protein.
          Length = 452

 Score = 34.3 bits (75), Expect = 0.33
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +2

Query: 269 KWCCCCNPWCYGSTSN 316
           KWCCCC P C GS  N
Sbjct: 26  KWCCCCFPCCRGSGKN 41


>AY462869-1|AAS58863.1|  498|Homo sapiens POTE8A protein.
          Length = 498

 Score = 34.3 bits (75), Expect = 0.33
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +2

Query: 269 KWCCCCNPWCYGSTSN 316
           KWCCCC P C GS  N
Sbjct: 26  KWCCCCFPCCRGSGKN 41


>CR545463-1|CAM28350.1|  545|Homo sapiens protein expressed in
           prostate, ovary, testis, and8) pseudogene protein.
          Length = 545

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 269 KWCCCCNPWCYGS 307
           KWCC C PWC GS
Sbjct: 63  KWCCHCFPWCRGS 75



 Score = 29.5 bits (63), Expect = 9.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 269 KWCCCCNPWCYGSTSN 316
           KWCC C P C GS  N
Sbjct: 137 KWCCHCFPCCRGSGKN 152


>AY466021-1|AAS58873.1|  288|Homo sapiens POTE22 protein.
          Length = 288

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 269 KWCCCCNPWCYGS 307
           KWCC C PWC GS
Sbjct: 63  KWCCHCFPWCRGS 75



 Score = 29.5 bits (63), Expect = 9.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 269 KWCCCCNPWCYGSTSN 316
           KWCC C P C GS  N
Sbjct: 137 KWCCHCFPCCRGSGKN 152


>AY465171-1|AAS58870.1|  594|Homo sapiens POTE14B protein.
          Length = 594

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 269 KWCCCCNPWCYGS 307
           KWCC C PWC GS
Sbjct: 63  KWCCHCFPWCRGS 75


>D31887-1|BAA06685.1|  531|Homo sapiens KIAA0062 protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 19/40 (47%), Positives = 25/40 (62%)
 Frame = -3

Query: 220 NGALIIMVVGGLSTELDLKIPMVRNKLIVPSVTVLIINAS 101
           NG L  M+    S+ELD K PMV  K+IV S++V  + AS
Sbjct: 318 NGDLDHMIPQHCSSELDGKAPMVDEKVIVGSLSVQDLQAS 357


>BC015770-1|AAH15770.1|  481|Homo sapiens SLC39A14 protein protein.
          Length = 481

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 19/40 (47%), Positives = 25/40 (62%)
 Frame = -3

Query: 220 NGALIIMVVGGLSTELDLKIPMVRNKLIVPSVTVLIINAS 101
           NG L  M+    S+ELD K PMV  K+IV S++V  + AS
Sbjct: 279 NGDLDHMIPQHCSSELDGKAPMVDEKVIVGSLSVQDLQAS 318


>AK172810-1|BAD18780.1|  492|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23971 fis, clone HEP18208. ).
          Length = 492

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 19/40 (47%), Positives = 25/40 (62%)
 Frame = -3

Query: 220 NGALIIMVVGGLSTELDLKIPMVRNKLIVPSVTVLIINAS 101
           NG L  M+    S+ELD K PMV  K+IV S++V  + AS
Sbjct: 279 NGDLDHMIPQHCSSELDGKAPMVDEKVIVGSLSVQDLQAS 318


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,860,128
Number of Sequences: 237096
Number of extensions: 1570778
Number of successful extensions: 2748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2745
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)