Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17b06
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79998-1|BAA11493.1| 265|Homo sapiens KIAA0176 protein. 195 6e-50
BC033329-1|AAH33329.1| 245|Homo sapiens KCTD2 protein protein. 195 6e-50
BC007314-1|AAH07314.1| 234|Homo sapiens potassium channel tetra... 192 6e-49
AK000047-1|BAA90906.1| 234|Homo sapiens protein ( Homo sapiens ... 192 6e-49
BC031038-1|AAH31038.1| 314|Homo sapiens KCTD17 protein protein. 169 6e-42
BC025403-1|AAH25403.1| 290|Homo sapiens potassium channel tetra... 169 6e-42
AL022314-1|CAA18441.1| 290|Homo sapiens protein ( Human DNA seq... 169 6e-42
AK022304-1|BAB14007.1| 290|Homo sapiens protein ( Homo sapiens ... 169 6e-42
BC068518-1|AAH68518.1| 389|Homo sapiens potassium channel tetra... 48 2e-05
BC021216-1|AAH21216.2| 389|Homo sapiens potassium channel tetra... 48 2e-05
AL391071-1|CAI41086.1| 181|Homo sapiens potassium channel tetra... 43 7e-04
BC036058-1|AAH36058.1| 260|Homo sapiens potassium channel tetra... 33 0.56
BC018063-1|AAH18063.1| 259|Homo sapiens potassium channel tetra... 33 0.56
AL138693-2|CAH72460.1| 259|Homo sapiens potassium channel tetra... 33 0.56
BC113435-1|AAI13436.1| 428|Homo sapiens potassium channel tetra... 31 3.0
BC111962-1|AAI11963.1| 428|Homo sapiens potassium channel tetra... 31 3.0
AB037738-1|BAA92555.1| 435|Homo sapiens KIAA1317 protein protein. 31 3.0
M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein. 29 9.1
CR457157-1|CAG33438.1| 442|Homo sapiens IGSF4 protein. 29 9.1
CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein. 29 9.1
BC125103-1|AAI25104.1| 414|Homo sapiens CADM1 protein protein. 29 9.1
BC125102-1|AAI25103.1| 415|Homo sapiens CADM1 protein protein. 29 9.1
BC047021-1|AAH47021.1| 387|Homo sapiens CADM1 protein protein. 29 9.1
BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complement... 29 9.1
AY358334-1|AAQ88700.1| 440|Homo sapiens IGSF4 protein. 29 9.1
AK075502-1|BAC11657.1| 443|Homo sapiens protein ( Homo sapiens ... 29 9.1
AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complement... 29 9.1
AF132811-1|AAF69029.1| 442|Homo sapiens nectin-like protein 2 p... 29 9.1
AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross comp... 29 9.1
AB094146-1|BAC66178.1| 333|Homo sapiens secretory isoform of TS... 29 9.1
AB017563-1|BAA75822.1| 442|Homo sapiens IGSF4 protein. 29 9.1
>D79998-1|BAA11493.1| 265|Homo sapiens KIAA0176 protein.
Length = 265
Score = 195 bits (476), Expect = 6e-50
Identities = 92/133 (69%), Positives = 109/133 (81%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
+LNYLRHGKL+I ++AEEGVLEEAEFYNI L+RLVKERI E R + KHVYRVL
Sbjct: 133 ILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVYRVL 192
Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIEST 362
Q EEELTQMVSTMSDGWKFEQLI+IGS YNYGN++ AEFLCVVSRE ++ N IE +
Sbjct: 193 QCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPS 252
Query: 363 DRAKVLQQKGSRM 401
++AK+LQ++GSRM
Sbjct: 253 EKAKILQERGSRM 265
>BC033329-1|AAH33329.1| 245|Homo sapiens KCTD2 protein protein.
Length = 245
Score = 195 bits (476), Expect = 6e-50
Identities = 92/133 (69%), Positives = 109/133 (81%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
+LNYLRHGKL+I ++AEEGVLEEAEFYNI L+RLVKERI E R + KHVYRVL
Sbjct: 113 ILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVYRVL 172
Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIEST 362
Q EEELTQMVSTMSDGWKFEQLI+IGS YNYGN++ AEFLCVVSRE ++ N IE +
Sbjct: 173 QCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPS 232
Query: 363 DRAKVLQQKGSRM 401
++AK+LQ++GSRM
Sbjct: 233 EKAKILQERGSRM 245
>BC007314-1|AAH07314.1| 234|Homo sapiens potassium channel
tetramerisation domain containing 5 protein.
Length = 234
Score = 192 bits (468), Expect = 6e-49
Identities = 91/133 (68%), Positives = 110/133 (82%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
VLNYLRHGKLVIN D+AEEGVLEEAEFYNIT LI+LVK++I R+ + + KHVYRVL
Sbjct: 102 VLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVL 161
Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIEST 362
Q EEELTQMVSTMSDGWKFEQL++IGS YNYGN++ AEFLCVVS+E +T E +
Sbjct: 162 QCQEEELTQMVSTMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPS 221
Query: 363 DRAKVLQQKGSRM 401
++AK+LQ++GSRM
Sbjct: 222 EKAKILQERGSRM 234
>AK000047-1|BAA90906.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ20040 fis, clone COL00417. ).
Length = 234
Score = 192 bits (468), Expect = 6e-49
Identities = 91/133 (68%), Positives = 110/133 (82%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
VLNYLRHGKLVIN D+AEEGVLEEAEFYNIT LI+LVK++I R+ + + KHVYRVL
Sbjct: 102 VLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVL 161
Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIEST 362
Q EEELTQMVSTMSDGWKFEQL++IGS YNYGN++ AEFLCVVS+E +T E +
Sbjct: 162 QCQEEELTQMVSTMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPS 221
Query: 363 DRAKVLQQKGSRM 401
++AK+LQ++GSRM
Sbjct: 222 EKAKILQERGSRM 234
>BC031038-1|AAH31038.1| 314|Homo sapiens KCTD17 protein protein.
Length = 314
Score = 169 bits (410), Expect = 6e-42
Identities = 79/129 (61%), Positives = 102/129 (79%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
+LN+LRHGKLV++ D+AEEGVLEEAEFYNI LIR++K+R+ ++ + KHVYRVL
Sbjct: 81 ILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVL 140
Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIEST 362
Q EEELTQMVSTMSDGW+FEQL+NIGS YNYG+++ AEFLCVVS+E ST N ES+
Sbjct: 141 QCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESS 200
Query: 363 DRAKVLQQK 389
+ K +++
Sbjct: 201 RKTKSTEEQ 209
>BC025403-1|AAH25403.1| 290|Homo sapiens potassium channel
tetramerisation domain containing 17 protein.
Length = 290
Score = 169 bits (410), Expect = 6e-42
Identities = 79/129 (61%), Positives = 102/129 (79%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
+LN+LRHGKLV++ D+AEEGVLEEAEFYNI LIR++K+R+ ++ + KHVYRVL
Sbjct: 81 ILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVL 140
Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIEST 362
Q EEELTQMVSTMSDGW+FEQL+NIGS YNYG+++ AEFLCVVS+E ST N ES+
Sbjct: 141 QCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESS 200
Query: 363 DRAKVLQQK 389
+ K +++
Sbjct: 201 RKTKSTEEQ 209
>AL022314-1|CAA18441.1| 290|Homo sapiens protein ( Human DNA
sequence from clone RP5-1170K4 on chromosome
22q12.2-13.1.Contains the MGAT3 gene for mannosyl
(beta-1,4-)-glycoprotein ).
Length = 290
Score = 169 bits (410), Expect = 6e-42
Identities = 79/129 (61%), Positives = 102/129 (79%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
+LN+LRHGKLV++ D+AEEGVLEEAEFYNI LIR++K+R+ ++ + KHVYRVL
Sbjct: 81 ILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVL 140
Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIEST 362
Q EEELTQMVSTMSDGW+FEQL+NIGS YNYG+++ AEFLCVVS+E ST N ES+
Sbjct: 141 QCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESS 200
Query: 363 DRAKVLQQK 389
+ K +++
Sbjct: 201 RKTKSTEEQ 209
>AK022304-1|BAB14007.1| 290|Homo sapiens protein ( Homo sapiens
cDNA FLJ12242 fis, clone MAMMA1001292. ).
Length = 290
Score = 169 bits (410), Expect = 6e-42
Identities = 79/129 (61%), Positives = 102/129 (79%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
+LN+LRHGKLV++ D+AEEGVLEEAEFYNI LIR++K+R+ ++ + KHVYRVL
Sbjct: 81 ILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVL 140
Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIEST 362
Q EEELTQMVSTMSDGW+FEQL+NIGS YNYG+++ AEFLCVVS+E ST N ES+
Sbjct: 141 QCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESS 200
Query: 363 DRAKVLQQK 389
+ K +++
Sbjct: 201 RKTKSTEEQ 209
>BC068518-1|AAH68518.1| 389|Homo sapiens potassium channel
tetramerisation domain containing 9 protein.
Length = 389
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKD 155
+LNYLRHG+L++N+ I GVLEEA F+ I LI ++ + ++ +P +D
Sbjct: 148 ILNYLRHGQLIVNDGINLLGVLEEARFFGIDSLIEHLE--VAIKNSQPPED 196
>BC021216-1|AAH21216.2| 389|Homo sapiens potassium channel
tetramerisation domain containing 9 protein.
Length = 389
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKD 155
+LNYLRHG+L++N+ I GVLEEA F+ I LI ++ + ++ +P +D
Sbjct: 148 ILNYLRHGQLIVNDGINLLGVLEEARFFGIDSLIEHLE--VAIKNSQPPED 196
>AL391071-1|CAI41086.1| 181|Homo sapiens potassium channel
tetramerisation domain containing 9-like protein.
Length = 181
Score = 42.7 bits (96), Expect = 7e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELI 104
+LN LRHG+L++N+ I GVLEEA F+ I LI
Sbjct: 148 ILNSLRHGQLIVNDGINLLGVLEEARFFGIVSLI 181
>BC036058-1|AAH36058.1| 260|Homo sapiens potassium channel
tetramerisation domain containing 21 protein.
Length = 260
Score = 33.1 bits (72), Expect = 0.56
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVL-EEAEFYNITELIRLVKER 122
+LN+LR L + D E G+L EA+FY + LI ++E+
Sbjct: 59 ILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEK 99
>BC018063-1|AAH18063.1| 259|Homo sapiens potassium channel
tetramerisation domain containing 4 protein.
Length = 259
Score = 33.1 bits (72), Expect = 0.56
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVL-EEAEFYNITELIRLVKER 122
VLN+LR+G+L++ E +L +EAEF+ + L VK R
Sbjct: 89 VLNFLRNGELLLPEGFRENQLLAQEAEFFQLKGLAEEVKSR 129
>AL138693-2|CAH72460.1| 259|Homo sapiens potassium channel
tetramerisation domain containing 4 protein.
Length = 259
Score = 33.1 bits (72), Expect = 0.56
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVL-EEAEFYNITELIRLVKER 122
VLN+LR+G+L++ E +L +EAEF+ + L VK R
Sbjct: 89 VLNFLRNGELLLPEGFRENQLLAQEAEFFQLKGLAEEVKSR 129
>BC113435-1|AAI13436.1| 428|Homo sapiens potassium channel
tetramerisation domain containing 16 protein.
Length = 428
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/38 (34%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLE-EAEFYNITELIRLV 113
+L+YLR ++V+ + E+G L+ EAE++ + +L++L+
Sbjct: 85 ILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLL 122
>BC111962-1|AAI11963.1| 428|Homo sapiens potassium channel
tetramerisation domain containing 16 protein.
Length = 428
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/38 (34%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLE-EAEFYNITELIRLV 113
+L+YLR ++V+ + E+G L+ EAE++ + +L++L+
Sbjct: 85 ILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLL 122
>AB037738-1|BAA92555.1| 435|Homo sapiens KIAA1317 protein protein.
Length = 435
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/38 (34%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 VLNYLRHGKLVINNDIAEEGVLE-EAEFYNITELIRLV 113
+L+YLR ++V+ + E+G L+ EAE++ + +L++L+
Sbjct: 92 ILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLL 129
>M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.1
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 132 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCV 311
R+ R K +K + VLQ +EE V +DG F +++ +GS ++ E L V
Sbjct: 31 RKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVL-VGSSAGGAGEQDYEVLLV 89
Query: 312 VS 317
S
Sbjct: 90 TS 91
>CR457157-1|CAG33438.1| 442|Homo sapiens IGSF4 protein.
Length = 442
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 54 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 110
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 111 LTNVSISDEGRYFCQLYTDPPQESY 135
>CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.1
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 132 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCV 311
R+ R K +K + VLQ +EE V +DG F +++ +GS ++ E L V
Sbjct: 31 RKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVL-VGSSAGGAGEQDYEVLLV 89
Query: 312 VS 317
S
Sbjct: 90 TS 91
>BC125103-1|AAI25104.1| 414|Homo sapiens CADM1 protein protein.
Length = 414
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 54 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 110
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 111 LTNVSISDEGRYFCQLYTDPPQESY 135
>BC125102-1|AAI25103.1| 415|Homo sapiens CADM1 protein protein.
Length = 415
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 55 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 111
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 112 LTNVSISDEGRYFCQLYTDPPQESY 136
>BC047021-1|AAH47021.1| 387|Homo sapiens CADM1 protein protein.
Length = 387
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 54 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 110
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 111 LTNVSISDEGRYFCQLYTDPPQESY 135
>BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.1
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 132 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCV 311
R+ R K +K + VLQ +EE V +DG F +++ +GS ++ E L V
Sbjct: 31 RKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVL-VGSSAGGAGEQDYEVLLV 89
Query: 312 VS 317
S
Sbjct: 90 TS 91
>AY358334-1|AAQ88700.1| 440|Homo sapiens IGSF4 protein.
Length = 440
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 52 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 108
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 109 LTNVSISDEGRYFCQLYTDPPQESY 133
>AK075502-1|BAC11657.1| 443|Homo sapiens protein ( Homo sapiens
cDNA PSEC0200 fis, clone HEMBA1001879, highly similar to
Mus musculus immunosuperfamily protein Bl2 mRNA. ).
Length = 443
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 54 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 110
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 111 LTNVSISDEGRYFCQLYTDPPQESY 135
>AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.1
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 132 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCV 311
R+ R K +K + VLQ +EE V +DG F +++ +GS ++ E L V
Sbjct: 31 RKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVL-VGSSAGGAGEQDYEVLLV 89
Query: 312 VS 317
S
Sbjct: 90 TS 91
>AF132811-1|AAF69029.1| 442|Homo sapiens nectin-like protein 2
protein.
Length = 442
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 54 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 110
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 111 LTNVSISDEGRYFCQLYTDPPQESY 135
>AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross
complementing protein 1 variant protein.
Length = 647
Score = 29.1 bits (62), Expect = 9.1
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 132 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCV 311
R+ R K +K + VLQ +EE V +DG F +++ +GS ++ E L V
Sbjct: 45 RKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVL-VGSSAGGAGEQDYEVLLV 103
Query: 312 VS 317
S
Sbjct: 104 TS 105
>AB094146-1|BAC66178.1| 333|Homo sapiens secretory isoform of
TSLC-1 protein.
Length = 333
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 54 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 110
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 111 LTNVSISDEGRYFCQLYTDPPQESY 135
>AB017563-1|BAA75822.1| 442|Homo sapiens IGSF4 protein.
Length = 442
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 VINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQM 212
VI ++A ++ +L+ ++ I R+ RPLKDS+ +++L F EL
Sbjct: 54 VIEGEVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSR---FQLLNFSSSELKVS 110
Query: 213 VSTMS---DGWKFEQLINIGSQYNY 278
++ +S +G F QL Q +Y
Sbjct: 111 LTNVSISDEGRYFCQLYTDPPQESY 135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,523,288
Number of Sequences: 237096
Number of extensions: 1129210
Number of successful extensions: 2692
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2692
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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