Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17b06
         (500 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031024-3|CAA19832.1|  308|Drosophila melanogaster EG:196F3.2 p...   171   3e-43
AE014298-230|AAF45642.1|  211|Drosophila melanogaster CG32810-PB...   171   3e-43
AY069257-1|AAL39402.1|  173|Drosophila melanogaster GM03763p pro...    58   9e-09
AY069350-1|AAL39495.1|  361|Drosophila melanogaster LD05823p pro...    48   9e-06
AE014297-80|AAF52131.3|  364|Drosophila melanogaster CG14647-PA ...    48   9e-06
AE013599-545|AAF59166.2|  922|Drosophila melanogaster CG14766-PA...    30   2.0  
AY075507-1|AAL68316.1|  452|Drosophila melanogaster RE54525p pro...    28   8.2  
AE014296-3396|AAF51624.2|  452|Drosophila melanogaster CG4786-PA...    28   8.2  

>AL031024-3|CAA19832.1|  308|Drosophila melanogaster EG:196F3.2
           protein.
          Length = 308

 Score =  171 bits (417), Expect = 3e-43
 Identities = 89/134 (66%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
           VLNYLRHGKLV++  ++EEGVLEEAEFYN+T+LI L+KE I  R++RP  D KK VYRVL
Sbjct: 80  VLNYLRHGKLVLDG-VSEEGVLEEAEFYNVTQLIALLKECILHRDQRPQTD-KKRVYRVL 137

Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQY-NYGNDEHAEFLCVVSRECGSTLNSNDIES 359
           Q  E+ELTQM+ST+SDGW+FEQLI++  QY NYG  E+ EFLCVVS+ECG+T    ++E 
Sbjct: 138 QCREQELTQMISTLSDGWRFEQLISM--QYTNYGPFENNEFLCVVSKECGTTA-GRELEL 194

Query: 360 TDRAKVLQQKGSRM 401
            DRAKVLQQKGSR+
Sbjct: 195 NDRAKVLQQKGSRI 208


>AE014298-230|AAF45642.1|  211|Drosophila melanogaster CG32810-PB
           protein.
          Length = 211

 Score =  171 bits (417), Expect = 3e-43
 Identities = 89/134 (66%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVL 182
           VLNYLRHGKLV++  ++EEGVLEEAEFYN+T+LI L+KE I  R++RP  D KK VYRVL
Sbjct: 80  VLNYLRHGKLVLDG-VSEEGVLEEAEFYNVTQLIALLKECILHRDQRPQTD-KKRVYRVL 137

Query: 183 QFHEEELTQMVSTMSDGWKFEQLINIGSQY-NYGNDEHAEFLCVVSRECGSTLNSNDIES 359
           Q  E+ELTQM+ST+SDGW+FEQLI++  QY NYG  E+ EFLCVVS+ECG+T    ++E 
Sbjct: 138 QCREQELTQMISTLSDGWRFEQLISM--QYTNYGPFENNEFLCVVSKECGTTA-GRELEL 194

Query: 360 TDRAKVLQQKGSRM 401
            DRAKVLQQKGSR+
Sbjct: 195 NDRAKVLQQKGSRI 208


>AY069257-1|AAL39402.1|  173|Drosophila melanogaster GM03763p
           protein.
          Length = 173

 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELI 104
           VLNYLRHGKLV++  ++EEGVLEEAEFYN+T+LI
Sbjct: 80  VLNYLRHGKLVLDG-VSEEGVLEEAEFYNVTQLI 112


>AY069350-1|AAL39495.1|  361|Drosophila melanogaster LD05823p
           protein.
          Length = 361

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 23/51 (45%), Positives = 36/51 (70%)
 Frame = +3

Query: 3   VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKD 155
           ++NYLRHG+ V +++I+  GVLEEA F+ I  L+  ++ER+  +E  PL D
Sbjct: 120 IINYLRHGQFVCDSNISVLGVLEEARFFGIFSLVTHLEERLGQQE-TPLGD 169


>AE014297-80|AAF52131.3|  364|Drosophila melanogaster CG14647-PA
           protein.
          Length = 364

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 23/51 (45%), Positives = 36/51 (70%)
 Frame = +3

Query: 3   VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKD 155
           ++NYLRHG+ V +++I+  GVLEEA F+ I  L+  ++ER+  +E  PL D
Sbjct: 123 IINYLRHGQFVCDSNISVLGVLEEARFFGIFSLVTHLEERLGQQE-TPLGD 172


>AE013599-545|AAF59166.2|  922|Drosophila melanogaster CG14766-PA
           protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 81  FYNITELIRLVKERICLR-ERRPLKDSKKHVYRVLQFHEEELTQM 212
           F  I E +R+ +E  C R E R L+DS    ++  + H  +LTQM
Sbjct: 167 FSKIVEAVRMFRE--CFRTEGRNLRDSNTPKWKSFKIHISQLTQM 209


>AY075507-1|AAL68316.1|  452|Drosophila melanogaster RE54525p
           protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 268 CEPILISCSNFQPSDIVETICVSSSS 191
           CEP+ I C    P +  E IC+S ++
Sbjct: 91  CEPLAIQCKEICPMEEPEPICLSDNN 116


>AE014296-3396|AAF51624.2|  452|Drosophila melanogaster CG4786-PA
           protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 268 CEPILISCSNFQPSDIVETICVSSSS 191
           CEP+ I C    P +  E IC+S ++
Sbjct: 91  CEPLAIQCKEICPMEEPEPICLSDNN 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,305,644
Number of Sequences: 53049
Number of extensions: 371435
Number of successful extensions: 943
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)