Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17b05
         (514 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46996-4|CAA87095.2|  101|Caenorhabditis elegans Hypothetical pr...    48   4e-06
Z74043-11|CAA98549.3|  303|Caenorhabditis elegans Hypothetical p...    27   7.9  

>Z46996-4|CAA87095.2|  101|Caenorhabditis elegans Hypothetical
           protein C34C12.4 protein.
          Length = 101

 Score = 48.0 bits (109), Expect = 4e-06
 Identities = 17/32 (53%), Positives = 26/32 (81%)
 Frame = +2

Query: 248 DPCECLWNHELAMRRLISLLRQGQSYCTESEC 343
           DPCEC ++HE AM+RL+++LR  Q+ CT++ C
Sbjct: 3   DPCECFFDHESAMQRLLAMLRNSQADCTDTGC 34


>Z74043-11|CAA98549.3|  303|Caenorhabditis elegans Hypothetical
           protein T19B10.10 protein.
          Length = 303

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = -1

Query: 283 GQLMIPEALARIHFITHN*VLKVTSFASVSEIRTIFDY*LY 161
           G L+I  A+  I+F T+  + KVT  A+ S+++T+F   LY
Sbjct: 172 GGLLINVAVVLIYFTTYIKLKKVT--ANASQLKTVFKSILY 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,897,371
Number of Sequences: 27780
Number of extensions: 202601
Number of successful extensions: 463
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)