Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17a08
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79600-3|CAB01876.1|  260|Caenorhabditis elegans Hypothetical pr...   150   9e-37
AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical...    27   7.9  
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    27   7.9  
AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical ...    27   7.9  
AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical ...    27   7.9  

>Z79600-3|CAB01876.1|  260|Caenorhabditis elegans Hypothetical
           protein F59C6.5 protein.
          Length = 260

 Score =  150 bits (363), Expect = 9e-37
 Identities = 67/148 (45%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
 Frame = +2

Query: 101 NVFRAFCNALYNTVDAPVTWFRETVVEP--NQKKYPWYHQNYRRVPTIDQCYDDDVVCDF 274
           +++  F    +   DAP TWFRET+V+P  N+ + P+YH+   RVP ID+C  +D  C +
Sbjct: 31  SIYPRFRYYAHKAFDAPATWFRETIVQPLNNKNRLPYYHRQLTRVPEIDECGVNDKACFY 90

Query: 275 EANAQFKRDRAVDSEILSILRQRYEDCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYGDL 454
           EAN Q++ D+ VD  IL  LRQR + CM+Y  PDH + C  + +  +  E  +F+KYG+L
Sbjct: 91  EANEQYRLDKMVDGFILQTLRQRVDRCMLYNNPDH-SPCAKVIEDMEENELNFFMKYGEL 149

Query: 455 GAYGDARKAYMKQKHRMVWERRNGPLSD 538
           G   D R AYMKQKHRM+WERR+  + D
Sbjct: 150 GGESDVRDAYMKQKHRMIWERRHPEIMD 177


>AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.11 protein.
          Length = 788

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
 Frame = +2

Query: 293 KRDRAVDSEILSILRQRYEDCMMYEQPDHAT-----KCRSLWDKYKSAEEAWFIKYGDLG 457
           +++  ++ ++ ++L Q   +C +Y+    +      + R   D YK   E  F K+GDL 
Sbjct: 541 EQNEGLEEKVENVLAQYRSECELYQNSVSSLQMDRDRLRKDVDLYKGKAEILFTKFGDLV 600

Query: 458 AYGD--ARKAYMK 490
              D   +KA+ K
Sbjct: 601 KTNDELEKKAHQK 613


>Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 239 DQCYDDDVVCDFEANAQFKRDRAVDSEILSILRQRYE 349
           D+ YDD+     E NA+F  +   DS+   I+  R E
Sbjct: 119 DEAYDDEEDFTVETNAEFNENSLDDSDEYPIVPNRQE 155


>Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 239 DQCYDDDVVCDFEANAQFKRDRAVDSEILSILRQRYE 349
           D+ YDD+     E NA+F  +   DS+   I+  R E
Sbjct: 119 DEAYDDEEDFTVETNAEFNENSLDDSDEYPIVPNRQE 155


>AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32b protein.
          Length = 216

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 455 GAYGDARKAYMKQKHRMVWERRNGP 529
           GAYGD    Y   + + +W++  GP
Sbjct: 75  GAYGDVGSVYGIAQQKRIWQKPRGP 99


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 455 GAYGDARKAYMKQKHRMVWERRNGP 529
           GAYGD    Y   + + +W++  GP
Sbjct: 243 GAYGDVGSVYGIAQQKRIWQKPRGP 267


>AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical
           protein F27B3.5 protein.
          Length = 787

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 299 DRAVDSEILSILRQRYEDCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYG 448
           D A    + S+ + + E   M+E     T C  L DKY    + WF ++G
Sbjct: 273 DLAFPKLLESVSQNKLETIDMFEAVAECTYC-CLLDKYLELVQVWFPQFG 321


>AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical
           protein C09E7.7 protein.
          Length = 995

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 299 DRAVDSEILSILRQRYEDCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYG 448
           D A    + S+ + + E   M+E     T C  L DKY    + WF ++G
Sbjct: 480 DLAFPKLLESVSQNKLETIDMFEAVAECTYC-CLLDKYLELVQVWFPQFG 528


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,789,410
Number of Sequences: 27780
Number of extensions: 258487
Number of successful extensions: 684
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)