Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17a06
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 213 6e-56
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 117 7e-27
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 95 3e-20
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 88 4e-18
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 68 4e-12
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 35 0.048
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 31 0.78
AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical ... 30 1.0
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 30 1.4
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 30 1.4
AF026209-8|AAB71275.2| 328|Caenorhabditis elegans Seven tm rece... 29 2.4
Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical p... 28 5.5
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 28 5.5
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 27 7.3
Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 213 bits (521), Expect = 6e-56
Identities = 104/148 (70%), Positives = 122/148 (82%)
Frame = +2
Query: 134 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME 313
MFLTRSEYDRGVNTFSPEGRLFQVEYAIEA+KLGST+IGI TSEGV+LA EKR TS LM
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 314 PTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLA 493
IEKI +VD+HI +GL+ADSRTLVERA++E QN WF YN ++ VE Q+V+NLA
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 494 IQFGDSDDDSGTAMSRPFGVAVMFAGID 577
+QFG DDD +MSRPFGVA++FAG+D
Sbjct: 121 LQFG--DDDVKASMSRPFGVAMLFAGVD 146
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 117 bits (281), Expect = 7e-27
Identities = 57/143 (39%), Positives = 88/143 (61%)
Frame = +2
Query: 149 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIE 328
+ YDR + FSP+G LFQVEYA EA+K GSTA+G+ + +V+ VEK+ L + TI
Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIR 61
Query: 329 KIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGD 508
KI +D H+ A +GL AD+R LV+RAR+ECQ++ + ++V ++ ++N +F
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 509 SDDDSGTAMSRPFGVAVMFAGID 577
S RPFG++++ G D
Sbjct: 122 SPG------RRPFGISMLIGGFD 138
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 95.1 bits (226), Expect = 3e-20
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI-EK 331
YD FSPEGRL+QVEYA+EAI T +GI +SEG+V+A E++ L++ + + EK
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 332 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 511
+ + +I+C V+G+ AD+ L+ R ++ Y E M VE Q V NL +
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVE---QLVQNLC---NEK 118
Query: 512 DDDSGTAMSRPFGVAVMFAGID 577
+ RPFGV++++ G D
Sbjct: 119 QRYTQIGGKRPFGVSLLYIGWD 140
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 88.2 bits (209), Expect = 4e-18
Identities = 48/144 (33%), Positives = 81/144 (56%)
Frame = +2
Query: 146 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI 325
R++YD V +SP+GRL QVEYA+EA+K GS +GI + V+ KR + L
Sbjct: 3 RNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ-- 60
Query: 326 EKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFG 505
+K+ E+D H +++GL++D R L + EC + + Y + + ++ A+++ L +Q
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESM-QLKLQ-- 117
Query: 506 DSDDDSGTAMSRPFGVAVMFAGID 577
++ RPFGV ++ AG D
Sbjct: 118 ---ANTQYYGRRPFGVGILIAGYD 138
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 86.6 bits (205), Expect = 1e-17
Identities = 49/141 (34%), Positives = 76/141 (53%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 334
Y + TFSP G+L Q+EYA+ A+K G ++G+ +GVVLA E + S L + K+
Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATE-NVGSVLTDDQ--PKV 61
Query: 335 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 514
++ +HI C SG+ D R LV++AR + +Y E M Q V+++A +
Sbjct: 62 EQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPT---IQLVTDIAAVMQEYT 118
Query: 515 DDSGTAMSRPFGVAVMFAGID 577
G RPFG +++ AG D
Sbjct: 119 QSGGV---RPFGASLLIAGWD 136
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 74.5 bits (175), Expect = 5e-14
Identities = 40/142 (28%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGICTSEGVVLAVEKRITSTLMEPTTIEK 331
+DR + FSPEGR++QVEYA +AI + TA+ + ++ V+AV+KR+ +L+ T+
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS 68
Query: 332 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 511
+ ++ + + C G++ D++ ++RA+ E + + M E A+ +++L +
Sbjct: 69 VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYY--- 125
Query: 512 DDDSGTAMSRPFGVAVMFAGID 577
+ A R G A++F D
Sbjct: 126 ---TQNAEMRSLGCALLFISYD 144
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 68.1 bits (159), Expect = 4e-12
Identities = 44/137 (32%), Positives = 64/137 (46%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 334
YD +TFSP+GR+FQVEYA +A+ T I I GVV+ +K I+S L ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 335 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 514
V+ ++ AV+G D L A E Y E M +++ A +V+
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI------- 120
Query: 515 DDSGTAMSRPFGVAVMF 565
+SRPFG F
Sbjct: 121 HIHTLGISRPFGAGAFF 137
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 34.7 bits (76), Expect = 0.048
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 233 GSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKIV-EVDRHIACAVSGLMADSRTLVERA 409
G T + + E V +A + RI + T +K V +V + ++G +D+RT++E+
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 410 RVECQNHWFVYNERMSVESCAQAVSNLAIQ 499
+ N + + ++ +SNLA Q
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQ 97
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 30.7 bits (66), Expect = 0.78
Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 209 YAIEAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMAD 385
Y E I G+T I + + GVV+ + R ++ + + KI + ++ SG AD
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 386 SRTLVERARVECQNHWFVYNERMSVESCAQ 475
++ + + A+ + N+ +++ +Q
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRSSQ 104
>AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical
protein C08G5.5 protein.
Length = 99
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 389 WSRPLDPKRRKRCVDLLQQSFRWSWVPSKLKLSFFPPPKQLPP 261
+ +PLDP+ +RC+ ++++ + + ++ PPP LPP
Sbjct: 7 YDKPLDPEDVRRCLKKVRENQAAREMAREPLVTHLPPPSGLPP 49
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 233 GSTAIGICTSEGVVLAVEKRITSTLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVER 406
G + I ++A + R+T + T EKI ++ +I SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 407 ARVECQNHWFVYNERMSVESCAQAVS 484
+ + F Y MSV+ CA+ +S
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLS 136
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 233 GSTAIGICTSEGVVLAVEKRITSTLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVER 406
G + I ++A + R+T + T EKI ++ +I SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 407 ARVECQNHWFVYNERMSVESCAQAVS 484
+ + F Y MSV+ CA+ +S
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLS 136
>AF026209-8|AAB71275.2| 328|Caenorhabditis elegans Seven tm
receptor protein 134 protein.
Length = 328
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 520 IIVTVSKLYS*VGNGLST*FYTHTLI-VHKPVVLTFNSGPFN*GPGVGH 377
+++T S LYS V N + TH L+ + K V + N GPF PG G+
Sbjct: 41 LMITFS-LYSVVYNYVD--IITHPLVLIEKQVFVVINHGPFRYTPGFGY 86
>Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical
protein C13C4.5 protein.
Length = 531
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 393 VLESAIR--PETAQAMCRSTSTIFSMVVGSIKVEVILFSTAKTT 268
++ AIR +TAQA +S T F + VG++ + VILF + T
Sbjct: 444 LISDAIRGNEDTAQAHYKSLVTSFWLCVGTLVLSVILFGISAIT 487
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 110 HLEYPNSKMFLTRSEYDRGVNTFSP--EGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAV 283
H +Y N + T+ EY++ ++ F E L V + I L A C ++ VL V
Sbjct: 1601 HPDYQNRPITYTQDEYEQRIDLFVKYFEDILSSVGHTIPVEALYMQA---C-NQNTVLRV 1656
Query: 284 EKRITSTLMEPTTIEKIVEVDRHIAC 361
+ + S L++ +I KIVE D+ C
Sbjct: 1657 LRHLDSRLLKTISI-KIVEDDQDKPC 1681
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 110 HLEYPNSKMFLTRSEYDRGVNTFSP--EGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAV 283
H +Y N + T+ EY++ ++ F E L V + I L A C ++ VL V
Sbjct: 1601 HPDYQNRPITYTQDEYEQRIDLFVKYFEDILSSVGHTIPVEALYMQA---C-NQNTVLRV 1656
Query: 284 EKRITSTLMEPTTIEKIVEVDRHIAC 361
+ + S L++ +I KIVE D+ C
Sbjct: 1657 LRHLDSRLLKTISI-KIVEDDQDKPC 1681
>Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 283 HRQNNSLRSTNANCSGAKFDSFYGVFHLEQP 191
HR + S+RS +CS ++F+ H+ QP
Sbjct: 30 HRMDVSMRSDPTDCSSDTTNTFHSSIHIIQP 60
>Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 283 HRQNNSLRSTNANCSGAKFDSFYGVFHLEQP 191
HR + S+RS +CS ++F+ H+ QP
Sbjct: 36 HRMDVSMRSDPTDCSSDTTNTFHSSIHIIQP 66
>Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 283 HRQNNSLRSTNANCSGAKFDSFYGVFHLEQP 191
HR + S+RS +CS ++F+ H+ QP
Sbjct: 30 HRMDVSMRSDPTDCSSDTTNTFHSSIHIIQP 60
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 283 HRQNNSLRSTNANCSGAKFDSFYGVFHLEQP 191
HR + S+RS +CS ++F+ H+ QP
Sbjct: 36 HRMDVSMRSDPTDCSSDTTNTFHSSIHIIQP 66
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 371 PKRRKRCVDLLQQSFRWSW-VPSKLKLSF 288
P R ++CV+ + FRW + VP L LSF
Sbjct: 11 PTRWEKCVEFIMFHFRWVFVVPFLLPLSF 39
>Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical
protein T09B9.4 protein.
Length = 528
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 284 EKRITSTLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERM 454
E+ +T +LM + KI +V A A LMAD + +ER R C Y E +
Sbjct: 217 EESLTKSLM--ANVAKIPDVHGDEAAAEK-LMADKQAEIERLRTYCSRAEKSYQEEL 270
>AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.8 protein.
Length = 367
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -2
Query: 488 SWKRPEHMILHSYAHCTQTSGFDIQLGPF---QLRSWSRPLDPKR-RKRCV 348
SW E + + Y + T GF +GP ++ +WS KR ++RC+
Sbjct: 124 SWSGIESKVSYVYKNKTLKMGFACYVGPLNRSEIINWSNKTQQKRCKERCL 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,524,670
Number of Sequences: 27780
Number of extensions: 326304
Number of successful extensions: 894
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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