Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16p23
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.54
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 2.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 2.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 6.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 8.7
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 8.7
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 8.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.7
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.0 bits (52), Expect = 0.54
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 148 LEMSSDRKKIPDPPTPVPSTG 210
LE ++ R++ P PP P PS+G
Sbjct: 1345 LERTAWRQQQPPPPPPPPSSG 1365
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 517 CLALYH*MNPSRVKFLVWILEFVQSPSLRV 428
C A+ + PS VK LV ++ ++Q PS +
Sbjct: 146 CTAVLRCVVPSFVKDLVRVVSWLQEPSFYI 175
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 517 CLALYH*MNPSRVKFLVWILEFVQSPSLRV 428
C A+ + PS VK LV ++ ++Q PS +
Sbjct: 146 CTAVLRCVVPSFVKDLVRVVSWLQEPSFYI 175
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 25 DNINTRFYFEIDTYIRLKIL 84
D+ NT FY IDT R KIL
Sbjct: 371 DSYNTEFYGSIDTLAR-KIL 389
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 25 DNINTRFYFEIDTYIRLKIL 84
D+ NT FY IDT R KIL
Sbjct: 371 DSYNTEFYGSIDTLAR-KIL 389
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 199 PSTGNLLS-NVAPPLQLPNFVTAVAEPMPTS 288
P +G L+ V L L F+ VAE MPT+
Sbjct: 220 PDSGEKLTLGVTILLSLTVFLNLVAESMPTT 250
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 199 PSTGNLLS-NVAPPLQLPNFVTAVAEPMPTS 288
P +G L+ V L L F+ VAE MPT+
Sbjct: 220 PDSGEKLTLGVTILLSLTVFLNLVAESMPTT 250
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 199 PSTGNLLS-NVAPPLQLPNFVTAVAEPMPTS 288
P +G L+ V L L F+ VAE MPT+
Sbjct: 220 PDSGEKLTLGVTILLSLTVFLNLVAESMPTT 250
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 199 PSTGNLLS-NVAPPLQLPNFVTAVAEPMPTS 288
P +G L+ V L L F+ VAE MPT+
Sbjct: 288 PDSGEKLTLGVTILLSLTVFLNLVAESMPTT 318
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 379 CPAIPPSKGTPLMSIRSPEDSE 444
C A+ P+KGT L+ D E
Sbjct: 500 CDAMKPTKGTELLKYLRKVDFE 521
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 433 EDSETAQTPESIPEISPEMDSFS 501
+D E ES+ E P +DSF+
Sbjct: 196 DDVEIKVQVESVIEFEPGLDSFT 218
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 286 T*ALVQRQQSQNLEVEAVVLH 224
T A+ QR+ S+NLE V+H
Sbjct: 19 TSAIHQRKSSKNLEHSMNVIH 39
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 178 PDPPTPVPSTGNLLSNVAPPLQLPNFVTAVA 270
P P VP N ++ PP LP+ +VA
Sbjct: 15 PSEPVYVPKGDNKVAFDIPPDYLPDRYRSVA 45
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 561 TTTGNCTLHPRQQPGAWHYITE*IH 487
T T NC + Q PGA + T +H
Sbjct: 874 TRTINCEIGGLQHPGAVVWFTVSLH 898
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,114
Number of Sequences: 438
Number of extensions: 3533
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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