Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16p05
         (249 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   4.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   4.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   4.0  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    20   4.0  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   5.3  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    19   7.1  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = +3

Query: 174 QSWNVFISCWSG 209
           + W +   CWSG
Sbjct: 830 ECWRLMEQCWSG 841


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = +3

Query: 174 QSWNVFISCWSG 209
           + W +   CWSG
Sbjct: 868 ECWRLMEQCWSG 879


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 46  EFVEQSHIKLKASPDGSTAV 105
           EF +    KLK  PDG T +
Sbjct: 643 EFGDVCRGKLKLPPDGRTEI 662


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 137 YYSSHESTVDITAVLPS 87
           + SS  STV +TA+ PS
Sbjct: 5   FLSSSVSTVIVTALTPS 21


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 71  LIWDCSTNSSFEISHTSSY 15
           LI+D   +SSF I H   Y
Sbjct: 336 LIYDFFKDSSFRIQHHFFY 354


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = -3

Query: 247 FFLVCKTFITVI*PLQHEINTFHDCINIQYSPYEC 143
           FF+  +   T    L   ++ F+  +   +SP+ C
Sbjct: 134 FFIYVQPSATFSLDLNKVVSVFYTAVIPMFSPFIC 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,595
Number of Sequences: 438
Number of extensions: 1186
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)