BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16n16
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. 32 1.8
BT009799-1|AAP88801.1| 911|Homo sapiens general transcription f... 32 1.8
BC020981-1|AAH20981.1| 911|Homo sapiens general transcription f... 32 1.8
BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein. 32 1.8
AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein. 32 1.8
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 31 4.3
BC028986-1|AAH28986.1| 458|Homo sapiens UBXD7 protein protein. 31 4.3
AB018337-1|BAA34514.1| 490|Homo sapiens KIAA0794 protein protein. 31 4.3
CR457101-1|CAG33382.1| 421|Homo sapiens ACP6 protein. 29 9.9
BC109100-1|AAI09101.1| 510|Homo sapiens zinc finger protein 75 ... 29 9.9
BC034686-1|AAH34686.1| 428|Homo sapiens acid phosphatase 6, lys... 29 9.9
BC009965-1|AAH09965.1| 428|Homo sapiens acid phosphatase 6, lys... 29 9.9
AY358552-1|AAQ88916.1| 428|Homo sapiens ITGV205 protein. 29 9.9
AL831984-1|CAD89900.1| 510|Homo sapiens hypothetical protein pr... 29 9.9
AL359207-2|CAI15199.1| 428|Homo sapiens acid phosphatase 6, lys... 29 9.9
AK000657-1|BAA91310.1| 428|Homo sapiens protein ( Homo sapiens ... 29 9.9
AB209248-1|BAD92485.1| 313|Homo sapiens acid phosphatase 6, lys... 29 9.9
AB031478-1|BAA89311.1| 421|Homo sapiens lysophosphatidic acid p... 29 9.9
AB030039-1|BAA94309.2| 428|Homo sapiens hPACPL1 protein. 29 9.9
>D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein.
Length = 911
Score = 31.9 bits (69), Expect = 1.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 283 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 453
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 454 PERYDMSFFKRG-LW 495
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BT009799-1|AAP88801.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 31.9 bits (69), Expect = 1.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 283 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 453
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 454 PERYDMSFFKRG-LW 495
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BC020981-1|AAH20981.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 31.9 bits (69), Expect = 1.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 283 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 453
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 454 PERYDMSFFKRG-LW 495
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein.
Length = 585
Score = 31.9 bits (69), Expect = 1.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 283 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 453
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 454 PERYDMSFFKRG-LW 495
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein.
Length = 534
Score = 31.9 bits (69), Expect = 1.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 283 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 453
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 454 PERYDMSFFKRG-LW 495
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 30.7 bits (66), Expect = 4.3
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 349 HPYYLEPLRSSTVRFQRSFLPRTI-RLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLG 525
H Y L ST RSFL R ++ +E+P FP + F + ++LS L
Sbjct: 746 HRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPSSREHHSFLKLCLKLLSNHLALA 805
Query: 526 SAPGIA-EVHGRR 561
A G+A + GR+
Sbjct: 806 LAGGVATSILGRQ 818
>BC028986-1|AAH28986.1| 458|Homo sapiens UBXD7 protein protein.
Length = 458
Score = 30.7 bits (66), Expect = 4.3
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = -3
Query: 358 SMDELYSGGGR----CDGKNEMPVSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDP 197
S EL+SG C E V + + +PH G + NR P +P V DP
Sbjct: 287 SESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDP 344
>AB018337-1|BAA34514.1| 490|Homo sapiens KIAA0794 protein protein.
Length = 490
Score = 30.7 bits (66), Expect = 4.3
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = -3
Query: 358 SMDELYSGGGR----CDGKNEMPVSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDP 197
S EL+SG C E V + + +PH G + NR P +P V DP
Sbjct: 319 SESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDP 376
>CR457101-1|CAG33382.1| 421|Homo sapiens ACP6 protein.
Length = 421
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 45 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 86
>BC109100-1|AAI09101.1| 510|Homo sapiens zinc finger protein 75
(D8C6) protein.
Length = 510
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -2
Query: 278 EHSPWNIRYKIQREPKSLRRPRGSKRSVRPGQLGARSAIFHPTAGYPNLMW 126
+H P N++ + R P G+K V +LG + + TA P W
Sbjct: 111 KHHPQNVKQALVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKW 161
>BC034686-1|AAH34686.1| 428|Homo sapiens acid phosphatase 6,
lysophosphatidic protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 52 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 93
>BC009965-1|AAH09965.1| 428|Homo sapiens acid phosphatase 6,
lysophosphatidic protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 52 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 93
>AY358552-1|AAQ88916.1| 428|Homo sapiens ITGV205 protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 52 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 93
>AL831984-1|CAD89900.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -2
Query: 278 EHSPWNIRYKIQREPKSLRRPRGSKRSVRPGQLGARSAIFHPTAGYPNLMW 126
+H P N++ + R P G+K V +LG + + TA P W
Sbjct: 111 KHHPQNVKQALVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKW 161
>AL359207-2|CAI15199.1| 428|Homo sapiens acid phosphatase 6,
lysophosphatidic protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 52 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 93
>AK000657-1|BAA91310.1| 428|Homo sapiens protein ( Homo sapiens
cDNA FLJ20650 fis, clone KAT01962. ).
Length = 428
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 52 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 93
>AB209248-1|BAD92485.1| 313|Homo sapiens acid phosphatase 6,
lysophosphatidic variant protein.
Length = 313
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 94 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 135
>AB031478-1|BAA89311.1| 421|Homo sapiens lysophosphatidic acid
phosphatase protein.
Length = 421
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 45 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 86
>AB030039-1|BAA94309.2| 428|Homo sapiens hPACPL1 protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MVKTRCRYHLEQFLRALPMEHTVQ-NTEGTEVPPQTQRFQTI 199
MV+ R+ L+ LP+E V+ N + EVPPQTQ T+
Sbjct: 52 MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTV 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,030,878
Number of Sequences: 237096
Number of extensions: 2697758
Number of successful extensions: 7183
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7181
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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