Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16m21
(287 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 1.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 3.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 3.0
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 3.0
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 20 5.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 20 5.3
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 9.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 9.2
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 9.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 9.2
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 1.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 266 ERNSWSEDSAVTDWRFKRPQSYPSFTSVVWSMVLSSTCFLLRFLENL 126
E N S+ + WR + P+S + + S ++ S LL + E +
Sbjct: 1215 ESNVESKGRLLGFWRVEMPRSNADYEVCIGSQIMVSPETLLSYDEKM 1261
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 3.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -1
Query: 212 PQSYPSFTSVVWSMVLSSTCFLLRFLENLSLMRAL 108
PQS + SM+ +TC+ L +L+++L
Sbjct: 347 PQSLTDMWLTMLSMISGATCYALFLGHATNLIQSL 381
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 3.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -1
Query: 212 PQSYPSFTSVVWSMVLSSTCFLLRFLENLSLMRAL 108
PQS + SM+ +TC+ L +L+++L
Sbjct: 315 PQSLTDMWLTMLSMISGATCYALFLGHATNLIQSL 349
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 3.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 84 AHYLNLHYKTGRDTTSFN 31
AH+L LH+K + ++F+
Sbjct: 511 AHWLTLHFKDPKVESAFH 528
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 20.2 bits (40), Expect = 5.3
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -1
Query: 224 RFKRPQSYPSFTSVVWSMVLSSTCFLLRF 138
RF++P + V+ + VL ++C+ R+
Sbjct: 76 RFRKPLPIEPWHGVLNATVLPNSCYQERY 104
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 20.2 bits (40), Expect = 5.3
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -1
Query: 224 RFKRPQSYPSFTSVVWSMVLSSTCFLLRF 138
RF++P + V+ + VL ++C+ R+
Sbjct: 76 RFRKPLPIEPWHGVLNATVLPNSCYQERY 104
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 162 RQYHAPHYRGE 194
++Y P YRGE
Sbjct: 247 KEYDLPDYRGE 257
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 162 RQYHAPHYRGE 194
++Y P YRGE
Sbjct: 247 KEYDLPDYRGE 257
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 144 QQKTCRRQYHAP 179
+Q+ R+YHAP
Sbjct: 562 EQRIALRKYHAP 573
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 215 RPQSYPSFTSVVWSMV 168
RP+ PSF W ++
Sbjct: 820 RPERLPSFDDECWRLM 835
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 144 QQKTCRRQYHAP 179
+Q+ R+YHAP
Sbjct: 600 EQRIALRKYHAP 611
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 215 RPQSYPSFTSVVWSMV 168
RP+ PSF W ++
Sbjct: 858 RPERLPSFDDECWRLM 873
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,525
Number of Sequences: 438
Number of extensions: 1367
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5744526
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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