Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16m08
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.5  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 274 SIYSFVVGAELLYERRSTSWDS 209
           SIYSF+    L++   S  W S
Sbjct: 477 SIYSFLERLNLIFMSSSLQWSS 498


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 274 SIYSFVVGAELLYERRSTSWDS 209
           SIYSF+    L++   S  W S
Sbjct: 515 SIYSFLERLNLIFMSSSLQWSS 536


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 2   ITNNMFKFICMYQNQNKFSFTDKW 73
           IT+N F F   Y N N   F  +W
Sbjct: 212 ITHNFFYFDPRYGNYNINGFNFQW 235


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = -1

Query: 639 CLWRCFGC 616
           C W CF C
Sbjct: 605 CCWHCFNC 612


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,966
Number of Sequences: 438
Number of extensions: 4024
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)