Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16l11
         (150 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    29   3.5  
BC027448-1|AAH27448.1|   85|Homo sapiens Unknown (protein for MG...    27   8.0  

>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -2

Query: 143 FILNYICIYSHFIRDKIVFLIIFGHLNIVYLHLQKHTYVHSQN 15
           +I  +IC+YS+  R   V++ I+     + +H+  H ++H+ N
Sbjct: 190 YIGMHICVYSYMHRYTYVYIHIY-----ICIHMYTHIHIHTHN 227


>BC027448-1|AAH27448.1|   85|Homo sapiens Unknown (protein for
           MGC:34919) protein.
          Length = 85

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -2

Query: 128 ICIYSHF--IRDKIVFLIIFGHLNIVYLHLQKHTYVHS 21
           +CIY+H   I    ++   + H  IVY++   HT+ H+
Sbjct: 30  VCIYTHTHTILCMYIYTHTYTHDYIVYVYTHTHTHTHT 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,125,146
Number of Sequences: 237096
Number of extensions: 240601
Number of successful extensions: 516
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 76,859,062
effective HSP length: 30
effective length of database: 69,746,182
effective search space used: 1325177458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)