Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16l06
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   4.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   5.9  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.9  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 203 PEWPQSASYWLTLSPDSIYDTLT 271
           P+W Q  + WL  SP+  YD +T
Sbjct: 652 PKWLQVLALWLNHSPN--YDQVT 672


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 526 PPSHPAQVRLRLQGDLEKQGHRP 594
           PP+ PA++R   + + E   +RP
Sbjct: 25  PPTRPARLRREAKPEAEPGNNRP 47


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 485 RCILPTIRSYP 453
           RC+L T+R YP
Sbjct: 402 RCLLETLRMYP 412


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 138 SKFLIALLYLYSLTSLWEITSPPN 209
           S FLI ++++YS  ++ ++T   N
Sbjct: 12  SIFLILIIFIYSNETIAQVTDDEN 35


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 138 SKFLIALLYLYSLTSLWEITSPPN 209
           S FLI ++++YS  ++ ++T   N
Sbjct: 12  SIFLILIIFIYSNETIAQVTDDEN 35


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 278 QKRYNDPIFYITENGWSSPPTNGLLDDDR 364
           +  YND  FY   NG +S  ++ L   ++
Sbjct: 135 ENNYNDNYFYSKSNGSNSSNSDVLFKQNK 163


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 596 DYEPNTTVMTID 631
           DY+P  T MTID
Sbjct: 232 DYDPKFTKMTID 243


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 596 DYEPNTTVMTID 631
           DY+P  T MTID
Sbjct: 232 DYDPKFTKMTID 243


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 596 DYEPNTTVMTID 631
           DY+P  T MTID
Sbjct: 232 DYDPKFTKMTID 243


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 592 PRLRAQHYRHDHRRGTLRHI 651
           P +   H+ H H+  +L+H+
Sbjct: 345 PTMGPPHHHHHHQTQSLQHL 364


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,412
Number of Sequences: 438
Number of extensions: 4795
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)