Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16k22
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209629-1|BAD92866.1|  843|Homo sapiens myosin VIIA variant pro...    31   3.1  
AK091555-1|BAC03695.1|  505|Homo sapiens protein ( Homo sapiens ...    31   4.1  
BC117363-1|AAI17364.1|  645|Homo sapiens synaptotagmin XVI protein.    30   7.2  
BC040924-1|AAH40924.1|  203|Homo sapiens SYT16 protein protein.        30   7.2  
AK057217-1|BAB71383.1|  621|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AB102949-1|BAC76810.1|  625|Homo sapiens synaptotagmin XIV-relat...    30   7.2  

>AB209629-1|BAD92866.1|  843|Homo sapiens myosin VIIA variant
           protein.
          Length = 843

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +3

Query: 105 AITRHGDS--GHVRTNLLCPCCGGDGELPHYGPRSNRRINRSCFVSP*PRRSRDTGAWTA 278
           A+ +H DS  G     +    C G+G      P +  +++    VSP  R +R + AW  
Sbjct: 748 ALIKHRDSSLGLWERAMALDTCPGEGR--RAAPSALSQLSVLAGVSPGDRGTRRSSAWQW 805

Query: 279 REECKTRGV 305
           R+ CK  GV
Sbjct: 806 RQTCKQAGV 814


>AK091555-1|BAC03695.1|  505|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34236 fis, clone FCBBF3027199, weakly similar to
           ANKYRIN. ).
          Length = 505

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 481 YAGCVPLHWHSMSGTYDLLDILRDQKTKLYHEEN 582
           Y+G  P+HW S +G  D L++L +     Y E N
Sbjct: 218 YSGYSPMHWASYTGHEDCLELLLEHSPFSYLEGN 251


>BC117363-1|AAI17364.1|  645|Homo sapiens synaptotagmin XVI protein.
          Length = 645

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 277 HGKSARREELLHAKSEDDVSISLYYNRKTNKVSLESLHGGHLKSVSWGLKDHEKGTLLLV 456
           H  S    + L      ++ + L YN  T ++S+E + G H ++++        G L L+
Sbjct: 491 HSDSTSSTQSLSHGGAPELLVGLSYNATTGRLSVEMIKGSHFRNLAVNRAPDTYGKLFLL 550

Query: 457 AS 462
            S
Sbjct: 551 NS 552


>BC040924-1|AAH40924.1|  203|Homo sapiens SYT16 protein protein.
          Length = 203

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 277 HGKSARREELLHAKSEDDVSISLYYNRKTNKVSLESLHGGHLKSVSWGLKDHEKGTLLLV 456
           H  S    + L      ++ + L YN  T ++S+E + G H ++++        G L L+
Sbjct: 49  HSDSTSSTQSLSHGGAPELLVGLSYNATTGRLSVEMIKGSHFRNLAVNRAPDTYGKLFLL 108

Query: 457 AS 462
            S
Sbjct: 109 NS 110


>AK057217-1|BAB71383.1|  621|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32655 fis, clone TESTI1000025, weakly similar to
           M.musculus mRNA for testis-specific protein, DDC8. ).
          Length = 621

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +1

Query: 301 ELLHAKSEDDVSISLYYNRKTNKVSLESLHG--GHLKSVSWGLKDHEKGTLLLVASSNGV 474
           E L      D+S+ ++Y  +  K   E       HLKS S   ++ E+G+ L   S +G 
Sbjct: 518 ESLEQMEHPDMSLEIHYKAELEKERREQRRARLAHLKSSSTRAQERERGSELSTTSPSGT 577

Query: 475 RL 480
            L
Sbjct: 578 SL 579


>AB102949-1|BAC76810.1|  625|Homo sapiens synaptotagmin XIV-related
           protein Strep14 protein.
          Length = 625

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 277 HGKSARREELLHAKSEDDVSISLYYNRKTNKVSLESLHGGHLKSVSWGLKDHEKGTLLLV 456
           H  S    + L      ++ + L YN  T ++S+E + G H ++++        G L L+
Sbjct: 471 HSDSTSSTQSLSHGGAPELLVGLSYNATTGRLSVEMIKGSHFRNLAVNRAPDTYGKLFLL 530

Query: 457 AS 462
            S
Sbjct: 531 NS 532


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,400,497
Number of Sequences: 237096
Number of extensions: 1861278
Number of successful extensions: 4492
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4491
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)